Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC130650.2-201ENST00000618736 2403 ntBASIC2.73□□□□□ -1.97
CLHC1Q8NHS4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLHC1Q8NHS4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AC080100.1-201ENST00000624239 5356 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 MIR483-201ENST00000385070 76 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 RNU6-796P-201ENST00000391086 107 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 SNORD88.1-201ENST00000408684 91 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AL096701.2-201ENST00000416920 238 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AC233981.1-201ENST00000423224 461 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AC004866.2-201ENST00000438285 481 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AL589880.1-201ENST00000448271 287 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 GSTA11P-201ENST00000452866 669 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 DYNLL1P6-201ENST00000503440 264 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 PSMA2P1-201ENST00000526365 646 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 OR4P1P-201ENST00000530808 1136 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AC023043.3-201ENST00000593113 385 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AC006539.2-201ENST00000601729 572 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AL136363.1-201ENST00000605349 337 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 YPEL5P2-201ENST00000605553 359 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AL161629.2-201ENST00000615347 275 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AL163051.2-201ENST00000618976 735 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 Z99129.2-201ENST00000619967 314 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 AL353748.2-201ENST00000622148 471 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 ZNF663P-202ENST00000641770 1131 ntBASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CLHC1Q8NHS4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
CLHC1Q8NHS4 MFSD8-213ENST00000641134 1327 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC092593.1-201ENST00000515413 1815 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 RNU6-525P-201ENST00000363685 104 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 ARF4P3-201ENST00000397387 509 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC092427.1-202ENST00000430569 476 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 RPS26P30-201ENST00000443431 335 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AL671855.1-201ENST00000446875 1203 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 NIPA2P5-201ENST00000452282 464 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC003982.1-202ENST00000469928 248 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC025181.1-201ENST00000477507 416 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC026427.2-201ENST00000506228 536 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AP003102.1-201ENST00000525638 661 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AL133271.1-201ENST00000538229 291 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC095057.3-201ENST00000567102 1157 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC106734.1-201ENST00000568646 663 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 BNIP3P4-201ENST00000604946 565 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC024560.3-201ENST00000608482 349 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC005046.1-201ENST00000608515 625 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AP004247.3-201ENST00000608682 624 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC090115.4-201ENST00000609970 188 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC096586.1-201ENST00000610267 561 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 AC010338.1-201ENST00000621823 717 ntBASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.71□□□□□ -1.98
CLHC1Q8NHS4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AC008669.1-201ENST00000565823 2178 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 MIR422A-201ENST00000362286 90 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 MIR525-201ENST00000384978 85 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 MTND4P13-201ENST00000402078 1023 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AL136372.1-201ENST00000403060 228 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 RNU6-77P-201ENST00000410554 91 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AC009237.2-201ENST00000421358 284 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 RPL27AP8-201ENST00000424277 446 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AL512649.1-201ENST00000428997 581 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 MTND4LP10-201ENST00000435146 291 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 NDUFB4P6-201ENST00000436819 366 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 HSFY3P-201ENST00000444242 1191 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms