Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.6□□□□□ -1.51
USP48Q86UV5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
USP48Q86UV5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
USP48Q86UV5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP48Q86UV5 MTND5P17-201ENST00000418405 1603 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP48Q86UV5 CBX3P1-201ENST00000325243 554 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 RNU6-1011P-201ENST00000384668 107 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 MIR19A-201ENST00000384878 82 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 RNU2-62P-201ENST00000410868 191 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 HMGN1P24-201ENST00000412282 298 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 AC011933.1-201ENST00000413334 321 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.59□□□□□ -1.51
USP48Q86UV5 SNRPEP10-201ENST00000420249 274 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.59□□□□□ -1.51
USP48Q86UV5 PHBP16-201ENST00000446318 950 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 AC079781.2-201ENST00000446424 169 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.59□□□□□ -1.51
USP48Q86UV5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.59□□□□□ -1.51
USP48Q86UV5 FDX1P2-201ENST00000450769 375 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 RAD23BP3-201ENST00000454157 1152 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.59□□□□□ -1.51
USP48Q86UV5 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.59□□□□□ -1.51
USP48Q86UV5 snoU109.4-201ENST00000458953 143 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 AC116533.1-201ENST00000459748 321 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 AC083798.1-201ENST00000472671 131 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 ST13P14-201ENST00000474095 734 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.59□□□□□ -1.51
USP48Q86UV5 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP48Q86UV5 AC021146.1-201ENST00000511202 716 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 FTH1P21-201ENST00000512179 511 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 RNU6-1220P-201ENST00000517126 108 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.59□□□□□ -1.51
USP48Q86UV5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.59□□□□□ -1.51
USP48Q86UV5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.59□□□□□ -1.51
USP48Q86UV5 AC233702.9-201ENST00000581528 203 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 AL008729.2-201ENST00000606393 473 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 AL359697.1-201ENST00000624879 587 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP48Q86UV5 EIF2AP4-201ENST00000424793 1781 ntBASIC5.59□□□□□ -1.51
USP48Q86UV5 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
USP48Q86UV5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
USP48Q86UV5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
USP48Q86UV5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
USP48Q86UV5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
USP48Q86UV5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
USP48Q86UV5 AP001273.1-201ENST00000624493 3152 ntBASIC5.59□□□□□ -1.52
USP48Q86UV5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
USP48Q86UV5 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP48Q86UV5 PCAT14-202ENST00000627127 3935 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP48Q86UV5 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP48Q86UV5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.58□□□□□ -1.52
USP48Q86UV5 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.58□□□□□ -1.52
USP48Q86UV5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP48Q86UV5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
USP48Q86UV5 SNORA71.2-201ENST00000364941 134 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP48Q86UV5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.58□□□□□ -1.52
USP48Q86UV5 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP48Q86UV5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP48Q86UV5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.58□□□□□ -1.52
USP48Q86UV5 AL451139.1-201ENST00000434718 346 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 SEPT14P3-201ENST00000439401 183 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.58□□□□□ -1.52
USP48Q86UV5 AL732372.2-207ENST00000445840 183 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP48Q86UV5 H2AFZP5-201ENST00000446960 382 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 IFNWP4-201ENST00000453148 294 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 SEPT14P2-201ENST00000453405 183 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.58□□□□□ -1.52
USP48Q86UV5 DEFB109F-201ENST00000491870 277 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.58□□□□□ -1.52
USP48Q86UV5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.58□□□□□ -1.52
USP48Q86UV5 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.58□□□□□ -1.52
USP48Q86UV5 SEPT14P4-201ENST00000513445 186 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 SNORA67.7-201ENST00000516664 135 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 RNU6-410P-201ENST00000517006 107 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 RNU6-709P-201ENST00000517257 104 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.58□□□□□ -1.52
USP48Q86UV5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.58□□□□□ -1.52
USP48Q86UV5 FO082796.1-201ENST00000523795 183 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 AF235103.2-201ENST00000525753 346 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.58□□□□□ -1.52
USP48Q86UV5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC5.58□□□□□ -1.52
USP48Q86UV5 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.58□□□□□ -1.52
USP48Q86UV5 CBX3P5-201ENST00000552017 521 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 SETP7-201ENST00000552169 453 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 FKBP1BP1-201ENST00000553366 325 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 OR4T1P-201ENST00000554933 911 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 AL161713.1-201ENST00000555538 145 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 AC025449.1-201ENST00000603896 529 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 Z84480.1-201ENST00000605131 311 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 AC007038.2-201ENST00000608095 740 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 AC004908.2-201ENST00000609090 574 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 AL138713.1-201ENST00000624026 2130 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.58□□□□□ -1.52
USP48Q86UV5 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.58□□□□□ -1.52
USP48Q86UV5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms