Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 RNU6-744P-201ENST00000365557 107 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 RNU6-1316P-201ENST00000384242 108 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 RNA5SP424-201ENST00000390988 115 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 RNA5SP171-201ENST00000391071 115 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 HLFP1-201ENST00000402375 499 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 RNA5SP129-201ENST00000410276 118 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AL035423.1-201ENST00000420331 213 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC004866.2-201ENST00000438285 481 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 MTND5P2-201ENST00000442927 1142 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 MTCO1P27-201ENST00000448269 226 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC098824.1-201ENST00000453565 980 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AL049830.2-201ENST00000480072 201 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 POU5F1P7-201ENST00000508759 541 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 RNU6-1129P-201ENST00000515964 104 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 SUMO2P20-201ENST00000520803 283 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC006960.3-201ENST00000561845 705 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC074050.1-201ENST00000563247 211 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 FAM60BP-201ENST00000578364 658 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC021171.1-201ENST00000603137 706 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC013444.2-201ENST00000603317 787 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 ELOCP35-201ENST00000604289 336 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC092354.2-201ENST00000607786 514 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AL031667.3-201ENST00000620124 655 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC002550.2-201ENST00000621246 394 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AL356596.1-201ENST00000624230 379 ntBASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX30Q5VWJ9 AL672296.1-201ENST00000427780 2158 ntBASIC3.9□□□□□ -1.78
SNX30Q5VWJ9 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SNX30Q5VWJ9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SNX30Q5VWJ9 PRO1804-201ENST00000623780 2050 ntBASIC3.9□□□□□ -1.78
SNX30Q5VWJ9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
SNX30Q5VWJ9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.9□□□□□ -1.78
SNX30Q5VWJ9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 RNA5SP51-201ENST00000364750 119 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 MIR1305-201ENST00000408300 86 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 MTCO1P17-201ENST00000411522 491 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AC107081.1-201ENST00000414975 361 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 RPL23AP39-201ENST00000415533 405 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 SKP1P1-201ENST00000438081 489 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 RPL23AP31-201ENST00000456160 467 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 RPL23AP62-201ENST00000463396 453 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AC006499.5-201ENST00000505037 514 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 SNRPGP16-201ENST00000533275 226 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AC008739.3-201ENST00000603262 127 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AL355810.1-201ENST00000614629 552 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 AL353748.2-201ENST00000622148 471 ntBASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.79
SNX30Q5VWJ9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.89□□□□□ -1.79
SNX30Q5VWJ9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX30Q5VWJ9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SNX30Q5VWJ9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX30Q5VWJ9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX30Q5VWJ9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms