Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AP000926.1-201ENST00000479573 241 ntBASIC4.62□□□□□ -1.67
VPS53Q5VIR6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 MTND5P4-201ENST00000514978 288 ntBASIC4.62□□□□□ -1.67
VPS53Q5VIR6 RNA5SP208-201ENST00000516156 78 ntBASIC4.62□□□□□ -1.67
VPS53Q5VIR6 Vault.1-201ENST00000516474 102 ntBASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AC009063.1-201ENST00000563342 702 ntBASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AC005255.1-201ENST00000593748 216 ntBASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 SEPT7P9-203ENST00000604116 343 ntBASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AL354798.1-201ENST00000622505 329 ntBASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AL603839.4-201ENST00000624658 1005 ntBASIC4.62□□□□□ -1.67
VPS53Q5VIR6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS53Q5VIR6 AL359893.1-201ENST00000447628 1580 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 Y_RNA.97-201ENST00000363094 102 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 RNU5E-5P-201ENST00000365379 116 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 RNU6-259P-201ENST00000383999 107 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 MIR199A2-201ENST00000385289 110 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 HMGN2P8-201ENST00000391458 268 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 HLFP1-201ENST00000402375 499 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AL356967.1-201ENST00000406305 431 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC022028.1-201ENST00000412054 408 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 HMGN1P14-201ENST00000412459 517 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 OFD1P18Y-201ENST00000420889 959 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 EIF1P1-201ENST00000421436 341 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC104651.1-201ENST00000427559 735 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 RPL37P21-201ENST00000435890 276 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 SNRPEP7-201ENST00000438350 220 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 DNAJC19P4-201ENST00000440115 345 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 VN1R10P-201ENST00000447106 875 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC104073.1-201ENST00000451988 151 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 HMGB3P30-201ENST00000457863 606 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 RAC1P2-201ENST00000511164 579 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 RNU6-150P-201ENST00000516237 95 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 HSPE1P5-201ENST00000561489 272 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 BNIP3P11-201ENST00000603878 563 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC112230.1-201ENST00000604342 547 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC126118.1-201ENST00000607744 628 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC006566.1-201ENST00000608943 513 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC109347.2-201ENST00000610220 349 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 OR11H5P-202ENST00000641612 1325 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 AC027287.1-201ENST00000553115 1453 ntBASIC4.61□□□□□ -1.67
VPS53Q5VIR6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS53Q5VIR6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS53Q5VIR6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS53Q5VIR6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS53Q5VIR6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS53Q5VIR6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS53Q5VIR6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
VPS53Q5VIR6 MT-TC-201ENST00000387405 66 ntBASIC4.6□□□□□ -1.67
VPS53Q5VIR6 Y_RNA.582-201ENST00000391023 95 ntBASIC4.6□□□□□ -1.67
VPS53Q5VIR6 RPL32P23-201ENST00000397237 405 ntBASIC4.6□□□□□ -1.67
VPS53Q5VIR6 RAC1P3-201ENST00000416129 580 ntBASIC4.6□□□□□ -1.67
VPS53Q5VIR6 MTND4LP11-201ENST00000422184 280 ntBASIC4.6□□□□□ -1.67
VPS53Q5VIR6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS53Q5VIR6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS53Q5VIR6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS53Q5VIR6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS53Q5VIR6 USP9YP7-201ENST00000436723 430 ntBASIC4.6□□□□□ -1.67
VPS53Q5VIR6 SNORA71B-202ENST00000439232 272 ntBASIC4.6□□□□□ -1.67
VPS53Q5VIR6 PDSS1P2-201ENST00000449397 678 ntBASIC4.6□□□□□ -1.67
VPS53Q5VIR6 AC093392.2-201ENST00000450682 337 ntBASIC4.6□□□□□ -1.67
VPS53Q5VIR6 USP9YP32-201ENST00000452432 430 ntBASIC4.6□□□□□ -1.67
VPS53Q5VIR6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms