Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AL627224.1-201ENST00000448334 444 ntBASIC3.29□□□□□ -1.88
COL16A1Q07092 RPL7P55-201ENST00000450522 746 ntBASIC3.29□□□□□ -1.88
COL16A1Q07092 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.29□□□□□ -1.88
COL16A1Q07092 RPL23AP49-201ENST00000492925 468 ntBASIC3.29□□□□□ -1.88
COL16A1Q07092 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.29□□□□□ -1.88
COL16A1Q07092 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.29□□□□□ -1.88
COL16A1Q07092 AC135279.1-201ENST00000543493 504 ntBASIC3.29□□□□□ -1.88
COL16A1Q07092 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.29□□□□□ -1.88
COL16A1Q07092 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL16A1Q07092 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.29□□□□□ -1.88
COL16A1Q07092 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL16A1Q07092 AC124283.4-201ENST00000581815 456 ntBASIC3.29□□□□□ -1.88
COL16A1Q07092 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.29□□□□□ -1.88
COL16A1Q07092 AP002802.2-201ENST00000605877 235 ntBASIC3.29□□□□□ -1.88
COL16A1Q07092 AC090617.9-201ENST00000623751 147 ntBASIC3.29□□□□□ -1.88
COL16A1Q07092 OR11H5P-202ENST00000641612 1325 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AC093831.2-201ENST00000624393 3427 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.28□□□□□ -1.88
COL16A1Q07092 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
COL16A1Q07092 CUL4AP1-201ENST00000514750 1863 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL16A1Q07092 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.28□□□□□ -1.88
COL16A1Q07092 SNORD116-2-201ENST00000384274 95 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 SNORD116-6-201ENST00000384711 96 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.28□□□□□ -1.88
COL16A1Q07092 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.28□□□□□ -1.88
COL16A1Q07092 VN1R31P-201ENST00000417498 730 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 MTCO3P4-201ENST00000419236 787 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AC005005.2-201ENST00000420779 380 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 Z82205.1-201ENST00000428456 297 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.28□□□□□ -1.88
COL16A1Q07092 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.28□□□□□ -1.88
COL16A1Q07092 AC105918.1-201ENST00000474399 838 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 RPL21P47-201ENST00000483696 477 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.28□□□□□ -1.88
COL16A1Q07092 HMGB1P38-201ENST00000490557 577 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.28□□□□□ -1.88
COL16A1Q07092 AC104090.1-201ENST00000506341 1171 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.28□□□□□ -1.88
COL16A1Q07092 DUXAP5-201ENST00000529668 529 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AL133271.1-201ENST00000538229 291 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.28□□□□□ -1.88
COL16A1Q07092 NOP56P3-201ENST00000549457 385 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 CYB5AP5-201ENST00000549779 389 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 MRPS36P5-201ENST00000551909 298 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL16A1Q07092 AC122134.1-201ENST00000565664 1104 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 snoU13.31-201ENST00000607291 104 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AC021851.1-201ENST00000608537 1082 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AP004247.3-201ENST00000608682 624 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AP002782.1-201ENST00000623107 614 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AC078883.4-201ENST00000623218 367 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 AC093875.1-201ENST00000623688 504 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.28□□□□□ -1.88
COL16A1Q07092 AC006927.2-201ENST00000639256 389 ntBASIC3.28□□□□□ -1.88
COL16A1Q07092 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL16A1Q07092 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.28□□□□□ -1.88
COL16A1Q07092 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL16A1Q07092 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL16A1Q07092 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL16A1Q07092 GABPAP-201ENST00000419271 1356 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 MIR423-201ENST00000362201 94 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 RNA5SP502-201ENST00000362694 119 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 RNU5B-4P-201ENST00000363508 111 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 RNU4-28P-201ENST00000364739 141 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
COL16A1Q07092 TAF9BP2-201ENST00000400856 499 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 AL606495.1-201ENST00000422100 813 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 PPIAP17-201ENST00000438507 471 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.27□□□□□ -1.89
COL16A1Q07092 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.27□□□□□ -1.89
COL16A1Q07092 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.27□□□□□ -1.89
COL16A1Q07092 OR8K4P-201ENST00000534608 872 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.27□□□□□ -1.89
COL16A1Q07092 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.27□□□□□ -1.89
COL16A1Q07092 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.27□□□□□ -1.89
COL16A1Q07092 OR4U1P-201ENST00000554958 912 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 AL355836.1-201ENST00000555951 870 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.27□□□□□ -1.89
COL16A1Q07092 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.27□□□□□ -1.89
COL16A1Q07092 PCNAP1-202ENST00000595299 752 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL16A1Q07092 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.27□□□□□ -1.89
COL16A1Q07092 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.27□□□□□ -1.89
COL16A1Q07092 AC012213.4-201ENST00000606457 354 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 AC091304.6-201ENST00000619761 202 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 AP002967.1-201ENST00000624203 539 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 AC139792.2-201ENST00000624218 587 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.27□□□□□ -1.89
COL16A1Q07092 CRYM-AS1-204ENST00000637983 556 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL16A1Q07092 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL16A1Q07092 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.27□□□□□ -1.89
COL16A1Q07092 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.27□□□□□ -1.89
COL16A1Q07092 AL353743.4-201ENST00000422653 1547 ntBASIC3.27□□□□□ -1.89
COL16A1Q07092 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL16A1Q07092 MTND5P28-201ENST00000438005 1594 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL16A1Q07092 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL16A1Q07092 Y_RNA.355-201ENST00000365462 98 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms