Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UBE3AQ05086 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBE3AQ05086 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.09□□□□□ -1.75
UBE3AQ05086 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UBE3AQ05086 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBE3AQ05086 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBE3AQ05086 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBE3AQ05086 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
UBE3AQ05086 RNU6-1155P-201ENST00000363554 107 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 RNU6-501P-201ENST00000364072 100 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 SNORA51.2-201ENST00000364595 132 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 TPMTP3-201ENST00000411928 735 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.09□□□□□ -1.75
UBE3AQ05086 ATP5A1P2-201ENST00000412323 255 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3AQ05086 OR1AA1P-201ENST00000419597 916 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 Z99497.1-201ENST00000421282 135 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 BX119904.4-201ENST00000424402 301 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 AL512649.1-201ENST00000428997 581 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3AQ05086 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.09□□□□□ -1.75
UBE3AQ05086 AL159987.2-201ENST00000432754 307 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3AQ05086 AL138799.3-201ENST00000438968 350 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 ELOCP8-201ENST00000439309 332 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3AQ05086 MTND1P30-201ENST00000441241 901 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 ELOCP15-201ENST00000442090 332 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3AQ05086 RPS3AP46-201ENST00000448352 682 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 SNORD105B-201ENST00000458770 79 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3AQ05086 AC021382.1-201ENST00000483523 359 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 RPL31P13-201ENST00000484151 370 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 AC026427.2-201ENST00000506228 536 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3AQ05086 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.09□□□□□ -1.75
UBE3AQ05086 RNU2-58P-201ENST00000516403 183 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 Y_RNA.688-201ENST00000516565 95 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 AC106038.2-201ENST00000520706 568 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.09□□□□□ -1.75
UBE3AQ05086 MIR3200-201ENST00000580767 85 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.09□□□□□ -1.75
UBE3AQ05086 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.09□□□□□ -1.75
UBE3AQ05086 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
UBE3AQ05086 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.09□□□□□ -1.75
UBE3AQ05086 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBE3AQ05086 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
UBE3AQ05086 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
UBE3AQ05086 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.09□□□□□ -1.76
UBE3AQ05086 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
UBE3AQ05086 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
UBE3AQ05086 MARK2P15-201ENST00000432204 2186 ntBASIC4.09□□□□□ -1.76
UBE3AQ05086 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.09□□□□□ -1.76
UBE3AQ05086 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
UBE3AQ05086 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3AQ05086 AP001486.2-201ENST00000561652 5113 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
UBE3AQ05086 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3AQ05086 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3AQ05086 RNU6-600P-201ENST00000362524 99 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 SNORD74.4-201ENST00000364129 80 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3AQ05086 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.08□□□□□ -1.76
UBE3AQ05086 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE3AQ05086 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
UBE3AQ05086 AC109780.2-201ENST00000413467 845 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.08□□□□□ -1.76
UBE3AQ05086 BEND7P1-201ENST00000422058 457 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 RPS27AP14-201ENST00000422868 454 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 RPL21P66-201ENST00000426566 466 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 AL445669.1-201ENST00000426743 755 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 Z74696.2-201ENST00000436514 498 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 HLA-N-201ENST00000437516 135 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 AC091862.1-201ENST00000438016 1100 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 AL512286.1-201ENST00000439244 400 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 HMGB1P37-201ENST00000439613 609 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 RANP8-201ENST00000444720 713 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 SETP11-201ENST00000473027 690 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 AC006517.1-201ENST00000480485 328 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 USP8P1-201ENST00000494673 3183 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 AC093278.1-201ENST00000494700 600 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 RPL23AP55-201ENST00000498163 452 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.08□□□□□ -1.76
UBE3AQ05086 OR5D17P-201ENST00000531492 978 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE3AQ05086 AC091515.1-201ENST00000548110 679 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE3AQ05086 AC034268.2-201ENST00000571784 482 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.08□□□□□ -1.76
UBE3AQ05086 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.08□□□□□ -1.76
UBE3AQ05086 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE3AQ05086 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3AQ05086 AC006254.3-201ENST00000603353 884 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 PRELID3BP8-201ENST00000604148 295 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 RNU1-30P-201ENST00000606575 163 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE3AQ05086 AC002550.2-201ENST00000621246 394 ntBASIC4.08□□□□□ -1.76
UBE3AQ05086 AC006378.2-201ENST00000623178 2476 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms