Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 TPMTP1-201ENST00000592307 737 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.44□□□□□ -2.18
PRKDCP78527 AL160394.1-201ENST00000624765 724 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
PRKDCP78527 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
PRKDCP78527 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
PRKDCP78527 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PRKDCP78527 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 AL627390.1-201ENST00000396055 340 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.43□□□□□ -2.18
PRKDCP78527 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.43□□□□□ -2.18
PRKDCP78527 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.43□□□□□ -2.18
PRKDCP78527 AL137072.1-201ENST00000603444 466 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 MIR7153-201ENST00000637758 57 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
PRKDCP78527 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.43□□□□□ -2.18
PRKDCP78527 AF127577.6-201ENST00000623352 2191 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 AC093775.1-201ENST00000624154 1868 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 NCSTNP1-201ENST00000406229 144 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.43□□□□□ -2.18
PRKDCP78527 OR52A4P-203ENST00000498233 1014 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.43□□□□□ -2.18
PRKDCP78527 CBX3P4-201ENST00000538909 354 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.43□□□□□ -2.18
PRKDCP78527 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.43□□□□□ -2.18
PRKDCP78527 AP000787.2-201ENST00000604432 568 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 CDC27P2-201ENST00000425026 1922 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PRKDCP78527 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.43□□□□□ -2.18
PRKDCP78527 AL645939.1-201ENST00000453429 797 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 BX322784.1-201ENST00000455793 1077 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 AC117532.1-201ENST00000514638 323 ntBASIC1.43□□□□□ -2.18
PRKDCP78527 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.43□□□□□ -2.18
PRKDCP78527 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
PRKDCP78527 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PRKDCP78527 SNORD21-201ENST00000383953 95 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 MIR3074-201ENST00000384885 81 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 IGHV3-76-201ENST00000522465 295 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 AC067805.1-201ENST00000559344 470 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.42□□□□□ -2.18
PRKDCP78527 AC005730.3-201ENST00000583067 366 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 AC002076.2-201ENST00000617362 122 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 LRRC77P-213ENST00000637727 880 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.42□□□□□ -2.18
PRKDCP78527 MTCO1P4-201ENST00000520516 1409 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
PRKDCP78527 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
PRKDCP78527 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
PRKDCP78527 AP000648.3-201ENST00000623539 4507 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.42□□□□□ -2.18
PRKDCP78527 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
PRKDCP78527 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.42□□□□□ -2.18
PRKDCP78527 AL513321.1-201ENST00000441175 761 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 AC004486.1-201ENST00000546846 233 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 AL627309.6-201ENST00000606857 840 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.42□□□□□ -2.18
PRKDCP78527 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.42□□□□□ -2.18
PRKDCP78527 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
PRKDCP78527 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
PRKDCP78527 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
PRKDCP78527 U8.8-201ENST00000365399 135 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 OR4R2P-201ENST00000530815 597 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
PRKDCP78527 AC068790.3-201ENST00000602988 553 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 AL512598.1-201ENST00000610158 273 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.42□□□□□ -2.18
PRKDCP78527 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
PRKDCP78527 Y_RNA.36-201ENST00000362602 112 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.42□□□□□ -2.18
PRKDCP78527 HMGN1P33-201ENST00000432945 451 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 AL591719.1-201ENST00000444669 744 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 snoU109.4-201ENST00000458953 143 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
PRKDCP78527 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.42□□□□□ -2.18
PRKDCP78527 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.42□□□□□ -2.18
PRKDCP78527 AL161670.1-201ENST00000554348 137 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.42□□□□□ -2.18
PRKDCP78527 AC012119.1-201ENST00000603184 222 ntBASIC1.42□□□□□ -2.18
PRKDCP78527 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.42□□□□□ -2.18
PRKDCP78527 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
PRKDCP78527 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.41□□□□□ -2.18
PRKDCP78527 AC066616.2-201ENST00000559334 1481 ntBASIC1.41□□□□□ -2.18
PRKDCP78527 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
PRKDCP78527 SET-203ENST00000372688 801 ntTSL 2 BASIC1.41□□□□□ -2.18
PRKDCP78527 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.41□□□□□ -2.18
PRKDCP78527 AC009969.1-201ENST00000438726 172 ntBASIC1.41□□□□□ -2.18
PRKDCP78527 MTND4LP16-201ENST00000440828 295 ntBASIC1.41□□□□□ -2.18
PRKDCP78527 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.41□□□□□ -2.18
PRKDCP78527 AC087441.2-201ENST00000529141 262 ntBASIC1.41□□□□□ -2.18
PRKDCP78527 NF1P5-201ENST00000588287 448 ntBASIC1.41□□□□□ -2.18
PRKDCP78527 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.41□□□□□ -2.18
PRKDCP78527 AC009501.3-201ENST00000605001 1352 ntBASIC1.41□□□□□ -2.18
PRKDCP78527 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.41□□□□□ -2.18
PRKDCP78527 AL355578.1-201ENST00000607405 1328 ntBASIC1.41□□□□□ -2.18
PRKDCP78527 AL590762.3-201ENST00000436372 640 ntBASIC1.41□□□□□ -2.18
PRKDCP78527 MTCYBP31-201ENST00000438855 1122 ntBASIC1.41□□□□□ -2.18
PRKDCP78527 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms