Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC108032.1-201ENST00000416706 207 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.27□□□□□ -1.89
CX3CL1P78423 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CL1P78423 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.27□□□□□ -1.89
CX3CL1P78423 AC233728.2-201ENST00000425348 757 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AL353777.1-201ENST00000425552 326 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 MTCO1P39-201ENST00000426148 480 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CL1P78423 AC006011.1-201ENST00000442758 349 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CL1P78423 AL121871.1-201ENST00000443413 436 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CL1P78423 snoU13.4-201ENST00000458916 104 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC055855.1-201ENST00000489563 579 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 RPL29P14-201ENST00000495837 428 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.27□□□□□ -1.89
CX3CL1P78423 MLLT10P2-201ENST00000506434 249 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 MTND4P2-201ENST00000507767 1203 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 CBX3P3-201ENST00000508108 532 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC093824.1-201ENST00000508796 343 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.27□□□□□ -1.89
CX3CL1P78423 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 RNU2-58P-201ENST00000516403 183 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 RNA5SP143-201ENST00000516936 115 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 PAICSP4-201ENST00000517543 1253 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC022616.6-201ENST00000520479 119 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC022878.1-201ENST00000530684 149 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AP000873.5-201ENST00000533906 236 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 AL133271.1-201ENST00000538229 291 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC123904.2-201ENST00000548059 300 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.27□□□□□ -1.89
CX3CL1P78423 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CL1P78423 AL356432.3-201ENST00000568952 465 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CL1P78423 MIR4644-201ENST00000579929 84 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC012417.1-201ENST00000582307 1039 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.27□□□□□ -1.89
CX3CL1P78423 AC087752.4-201ENST00000605911 462 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.27□□□□□ -1.89
CX3CL1P78423 AL450472.3-201ENST00000615578 367 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 MIR6130-201ENST00000619419 109 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC009268.2-201ENST00000621925 457 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AL161637.1-201ENST00000622380 412 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC116667.1-201ENST00000604855 2072 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 MAPK10-373ENST00000641983 6772 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CX3CL1P78423 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.27□□□□□ -1.89
CX3CL1P78423 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.27□□□□□ -1.89
CX3CL1P78423 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CX3CL1P78423 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CL1P78423 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CL1P78423 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CL1P78423 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CX3CL1P78423 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CL1P78423 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.26□□□□□ -1.89
CX3CL1P78423 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CL1P78423 RPL32P3-201ENST00000359025 275 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 RNU4-24P-201ENST00000364565 139 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 RNU6-637P-201ENST00000384050 107 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 SNORA37-201ENST00000384504 129 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 MIR19A-201ENST00000384878 82 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CL1P78423 MIR1183-201ENST00000408856 89 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 Y_RNA.598-201ENST00000410480 95 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CL1P78423 RPL21P32-201ENST00000419877 477 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 MTCO2P34-201ENST00000421994 607 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AC011742.1-201ENST00000431448 434 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AL353706.1-201ENST00000436728 494 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AL022238.1-201ENST00000442557 355 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CL1P78423 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CL1P78423 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 MTCO2P18-201ENST00000457151 658 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 OR9M1P-201ENST00000459641 921 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 RPL38P1-201ENST00000460914 211 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 RPS23P7-201ENST00000466210 444 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 RPL23AP41-201ENST00000484754 458 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 RPS3AP50-201ENST00000487064 803 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AC026979.1-201ENST00000492525 396 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 RN7SL604P-201ENST00000492589 296 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 CEACAMP10-202ENST00000495431 496 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AC022483.1-201ENST00000514020 567 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 SNORA31.9-201ENST00000516429 84 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms