Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.14□□□□□ -1.91
RPS4XP62701 HMGB3P15-201ENST00000507326 574 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.14□□□□□ -1.91
RPS4XP62701 MTCO2P32-201ENST00000514865 403 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 RNU6-1231P-201ENST00000517185 103 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 AC011602.1-201ENST00000546484 331 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 CR383656.7-201ENST00000548164 174 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.14□□□□□ -1.91
RPS4XP62701 AC037471.2-201ENST00000564941 598 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 ZNF415P1-201ENST00000582279 1166 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.14□□□□□ -1.91
RPS4XP62701 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.14□□□□□ -1.91
RPS4XP62701 AC061975.8-201ENST00000587058 721 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 VN1R82P-201ENST00000601481 356 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 AC004853.1-201ENST00000604902 698 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 AC112220.3-201ENST00000605502 502 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 AC107952.2-201ENST00000606048 486 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 AL355810.1-201ENST00000614629 552 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
RPS4XP62701 ZNF876P-202ENST00000398732 1485 ntBASIC3.14□□□□□ -1.91
RPS4XP62701 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPS4XP62701 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPS4XP62701 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPS4XP62701 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPS4XP62701 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPS4XP62701 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.13□□□□□ -1.91
RPS4XP62701 AL022578.1-201ENST00000439330 1433 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AL049781.1-201ENST00000623195 3585 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AL356274.2-201ENST00000624379 3752 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AL672296.1-201ENST00000427780 2158 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 FAM133CP-201ENST00000332869 704 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 OR5H2-201ENST00000355273 945 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 RNU6-28P-201ENST00000362378 107 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 RNU6-157P-201ENST00000383957 107 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.13□□□□□ -1.91
RPS4XP62701 RPS24P7-201ENST00000416921 246 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RPS4XP62701 AC006960.1-201ENST00000419980 153 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AL137014.1-201ENST00000420490 1226 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 RPL23AP82-202ENST00000427528 469 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.13□□□□□ -1.91
RPS4XP62701 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.13□□□□□ -1.91
RPS4XP62701 ZYG11AP1-201ENST00000430329 837 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.13□□□□□ -1.91
RPS4XP62701 MTCYBP45-201ENST00000435243 565 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.13□□□□□ -1.91
RPS4XP62701 MTCYBP31-201ENST00000438855 1122 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AL662791.1-201ENST00000441992 928 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.13□□□□□ -1.91
RPS4XP62701 CENPBD1P1-201ENST00000464061 469 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 RN7SL601P-201ENST00000471221 293 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RPS4XP62701 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.13□□□□□ -1.91
RPS4XP62701 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RPS4XP62701 RN7SKP13-201ENST00000515933 244 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 RN7SKP265-201ENST00000516448 223 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 RNA5SP468-201ENST00000516782 93 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AC103843.2-201ENST00000530523 682 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.13□□□□□ -1.91
RPS4XP62701 MTND1P24-201ENST00000552175 861 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AC090615.1-201ENST00000577519 154 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AC006116.10-201ENST00000591836 581 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.13□□□□□ -1.91
RPS4XP62701 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 AL158042.1-201ENST00000605338 460 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPS4XP62701 AL513302.2-201ENST00000562313 1842 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.13□□□□□ -1.91
RPS4XP62701 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
RPS4XP62701 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPS4XP62701 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RPS4XP62701 OTUD4P1-201ENST00000237841 3067 ntBASIC3.13□□□□□ -1.91
RPS4XP62701 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPS4XP62701 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RPS4XP62701 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPS4XP62701 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPS4XP62701 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RPS4XP62701 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RPS4XP62701 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RPS4XP62701 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RPS4XP62701 RNU6-757P-201ENST00000410334 100 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 RN7SKP111-201ENST00000410349 271 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 RNA5SP31-201ENST00000411144 127 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.12□□□□□ -1.91
RPS4XP62701 BX842559.1-201ENST00000419615 532 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 AL158156.1-201ENST00000422509 473 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 MTCO2P17-201ENST00000424336 677 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 MTCO1P39-201ENST00000426148 480 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 AC079780.1-201ENST00000428259 207 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 MTND1P32-201ENST00000433043 938 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.12□□□□□ -1.91
RPS4XP62701 AC006539.3-201ENST00000454258 129 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 RPL23AP67-201ENST00000465341 474 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.12□□□□□ -1.91
RPS4XP62701 AC093278.1-201ENST00000494700 600 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.12□□□□□ -1.91
RPS4XP62701 AC034244.1-201ENST00000507687 207 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 KLHL2P1-201ENST00000508691 521 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 AC093677.1-201ENST00000514414 678 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms