Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RNU1-100P-201ENST00000365255 165 ntBASIC2.37□□□□□ -2.03
LSM6P62312 MIR493-201ENST00000385254 89 ntBASIC2.37□□□□□ -2.03
LSM6P62312 U3.29-201ENST00000391296 212 ntBASIC2.37□□□□□ -2.03
LSM6P62312 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.37□□□□□ -2.03
LSM6P62312 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM6P62312 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.37□□□□□ -2.03
LSM6P62312 RPS20P25-201ENST00000412447 352 ntBASIC2.37□□□□□ -2.03
LSM6P62312 EZH2P1-201ENST00000431167 291 ntBASIC2.37□□□□□ -2.03
LSM6P62312 AC010881.1-201ENST00000433830 235 ntBASIC2.37□□□□□ -2.03
LSM6P62312 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM6P62312 RPS24P13-201ENST00000442520 397 ntBASIC2.37□□□□□ -2.03
LSM6P62312 RNF2P1-201ENST00000442955 1010 ntBASIC2.37□□□□□ -2.03
LSM6P62312 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM6P62312 SNRPGP6-201ENST00000451124 220 ntBASIC2.37□□□□□ -2.03
LSM6P62312 AL359385.1-201ENST00000456509 365 ntBASIC2.37□□□□□ -2.03
LSM6P62312 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM6P62312 KC877373.1-201ENST00000479066 408 ntBASIC2.37□□□□□ -2.03
LSM6P62312 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM6P62312 MTCO3P42-201ENST00000509488 518 ntBASIC2.37□□□□□ -2.03
LSM6P62312 TBCAP3-201ENST00000512475 312 ntBASIC2.37□□□□□ -2.03
LSM6P62312 MTCO3P39-201ENST00000514812 518 ntBASIC2.37□□□□□ -2.03
LSM6P62312 RNA5SP367-201ENST00000516557 118 ntBASIC2.37□□□□□ -2.03
LSM6P62312 HAUS1P3-201ENST00000523909 662 ntBASIC2.37□□□□□ -2.03
LSM6P62312 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM6P62312 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM6P62312 AC007954.1-201ENST00000554198 494 ntBASIC2.37□□□□□ -2.03
LSM6P62312 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM6P62312 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM6P62312 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM6P62312 MIR3609-201ENST00000582661 80 ntBASIC2.37□□□□□ -2.03
LSM6P62312 AL356575.1-201ENST00000603008 283 ntBASIC2.37□□□□□ -2.03
LSM6P62312 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
LSM6P62312 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LSM6P62312 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
LSM6P62312 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LSM6P62312 RNU1-138P-201ENST00000384093 164 ntBASIC2.36□□□□□ -2.03
LSM6P62312 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.36□□□□□ -2.03
LSM6P62312 AL356320.2-201ENST00000417263 507 ntBASIC2.36□□□□□ -2.03
LSM6P62312 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.36□□□□□ -2.03
LSM6P62312 AL513175.2-201ENST00000422071 443 ntBASIC2.36□□□□□ -2.03
LSM6P62312 RPL27AP8-201ENST00000424277 446 ntBASIC2.36□□□□□ -2.03
LSM6P62312 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.36□□□□□ -2.03
LSM6P62312 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.36□□□□□ -2.03
LSM6P62312 AC006946.1-201ENST00000429106 328 ntBASIC2.36□□□□□ -2.03
LSM6P62312 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LSM6P62312 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.36□□□□□ -2.03
LSM6P62312 MRPL50P4-201ENST00000446432 475 ntBASIC2.36□□□□□ -2.03
LSM6P62312 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LSM6P62312 AC010099.1-201ENST00000455434 375 ntBASIC2.36□□□□□ -2.03
LSM6P62312 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.36□□□□□ -2.03
LSM6P62312 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.36□□□□□ -2.03
LSM6P62312 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.36□□□□□ -2.03
LSM6P62312 CDC42P4-201ENST00000510507 563 ntBASIC2.36□□□□□ -2.03
LSM6P62312 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.36□□□□□ -2.03
LSM6P62312 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.36□□□□□ -2.03
LSM6P62312 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.36□□□□□ -2.03
LSM6P62312 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.36□□□□□ -2.03
LSM6P62312 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.36□□□□□ -2.03
LSM6P62312 CYCSP39-201ENST00000565821 309 ntBASIC2.36□□□□□ -2.03
LSM6P62312 AC103810.1-201ENST00000579873 453 ntBASIC2.36□□□□□ -2.03
LSM6P62312 AL035413.2-201ENST00000604801 525 ntBASIC2.36□□□□□ -2.03
LSM6P62312 AC006329.2-201ENST00000611491 394 ntBASIC2.36□□□□□ -2.03
LSM6P62312 AC245517.5-201ENST00000611529 162 ntBASIC2.36□□□□□ -2.03
LSM6P62312 AL161629.2-201ENST00000615347 275 ntBASIC2.36□□□□□ -2.03
LSM6P62312 SNHG22-203ENST00000617833 660 ntBASIC2.36□□□□□ -2.03
LSM6P62312 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LSM6P62312 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
LSM6P62312 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
LSM6P62312 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LSM6P62312 AC109315.1-201ENST00000584143 1347 ntBASIC2.36□□□□□ -2.03
LSM6P62312 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.36□□□□□ -2.03
LSM6P62312 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LSM6P62312 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.35□□□□□ -2.03
LSM6P62312 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LSM6P62312 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LSM6P62312 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.35□□□□□ -2.03
LSM6P62312 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.35□□□□□ -2.03
LSM6P62312 RNA5SP393-201ENST00000363423 117 ntBASIC2.35□□□□□ -2.03
LSM6P62312 RNU2-17P-201ENST00000410290 190 ntBASIC2.35□□□□□ -2.03
LSM6P62312 RNU6-193P-201ENST00000410977 107 ntBASIC2.35□□□□□ -2.03
LSM6P62312 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM6P62312 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM6P62312 ST13P20-201ENST00000447996 1065 ntBASIC2.35□□□□□ -2.03
LSM6P62312 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.35□□□□□ -2.03
LSM6P62312 AP000852.1-201ENST00000472460 573 ntBASIC2.35□□□□□ -2.03
LSM6P62312 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.35□□□□□ -2.03
LSM6P62312 AC006445.2-201ENST00000510061 472 ntBASIC2.35□□□□□ -2.03
LSM6P62312 OR5BM1P-201ENST00000512021 366 ntBASIC2.35□□□□□ -2.03
LSM6P62312 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM6P62312 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LSM6P62312 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM6P62312 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM6P62312 MED28P6-201ENST00000558776 231 ntBASIC2.35□□□□□ -2.03
LSM6P62312 AC009163.5-201ENST00000575421 637 ntBASIC2.35□□□□□ -2.03
LSM6P62312 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM6P62312 AL161756.2-201ENST00000604597 246 ntBASIC2.35□□□□□ -2.03
LSM6P62312 AC034102.8-201ENST00000615146 484 ntBASIC2.35□□□□□ -2.03
LSM6P62312 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.35□□□□□ -2.03
LSM6P62312 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.35□□□□□ -2.03
LSM6P62312 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms