Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AC106900.2-201ENST00000604994 317 ntBASIC1.84□□□□□ -2.11
FOXA3P55318 YPEL5P2-201ENST00000605553 359 ntBASIC1.84□□□□□ -2.11
FOXA3P55318 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.84□□□□□ -2.11
FOXA3P55318 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
FOXA3P55318 ZNF720P1-201ENST00000562403 1939 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC010680.1-201ENST00000590024 3590 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
FOXA3P55318 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
FOXA3P55318 MIRLET7G-201ENST00000362280 84 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.83□□□□□ -2.12
FOXA3P55318 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
FOXA3P55318 RNU1-52P-201ENST00000384190 164 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 RNU6-1072P-201ENST00000384703 107 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 RNU6-443P-201ENST00000384780 107 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
FOXA3P55318 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXA3P55318 RNU6-193P-201ENST00000410977 107 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXA3P55318 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.83□□□□□ -2.12
FOXA3P55318 RPS3AP9-201ENST00000417027 792 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXA3P55318 MORF4L1P7-201ENST00000426038 703 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.83□□□□□ -2.12
FOXA3P55318 AL139132.1-201ENST00000431587 344 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 OR4K11P-201ENST00000431829 904 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXA3P55318 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC1.83□□□□□ -2.12
FOXA3P55318 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXA3P55318 MTCO3P17-201ENST00000443775 513 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.83□□□□□ -2.12
FOXA3P55318 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXA3P55318 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.83□□□□□ -2.12
FOXA3P55318 AC026427.2-201ENST00000506228 536 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC008885.2-201ENST00000509506 930 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
FOXA3P55318 HIGD1AP13-201ENST00000509878 289 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC074250.1-201ENST00000511117 192 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC104057.1-201ENST00000515547 497 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXA3P55318 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 OR4R2P-201ENST00000530815 597 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.83□□□□□ -2.12
FOXA3P55318 AC018630.1-201ENST00000541376 925 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXA3P55318 AC078814.3-201ENST00000553036 491 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC053481.3-201ENST00000577881 843 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC008739.3-201ENST00000603262 127 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AL356280.1-201ENST00000603614 379 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC013468.1-201ENST00000608680 598 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 AC106028.5-201ENST00000610332 395 ntBASIC1.83□□□□□ -2.12
FOXA3P55318 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.83□□□□□ -2.12
FOXA3P55318 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.83□□□□□ -2.12
FOXA3P55318 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.83□□□□□ -2.12
FOXA3P55318 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
FOXA3P55318 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.83□□□□□ -2.12
FOXA3P55318 AC244517.1-201ENST00000606030 2086 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.82□□□□□ -2.12
FOXA3P55318 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
FOXA3P55318 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
FOXA3P55318 RNU6-989P-201ENST00000362756 107 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
FOXA3P55318 MIR493-201ENST00000385254 89 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AL138885.1-201ENST00000405921 675 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AL513331.1-201ENST00000411908 397 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 RPS15AP38-201ENST00000413110 372 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.82□□□□□ -2.12
FOXA3P55318 AL158825.1-201ENST00000414735 521 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 MORF4L1P6-201ENST00000418771 268 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AC099677.1-201ENST00000420575 175 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.82□□□□□ -2.12
FOXA3P55318 RPL35AP12-201ENST00000425362 338 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 YME1L1P1-201ENST00000429435 297 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 MRPS33P4-201ENST00000434892 317 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AC097499.1-201ENST00000444277 208 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.82□□□□□ -2.12
FOXA3P55318 AC010099.1-201ENST00000455434 375 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXA3P55318 AC092798.1-201ENST00000458542 409 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AL135752.1-201ENST00000479477 471 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AC104435.1-201ENST00000483483 166 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.82□□□□□ -2.12
FOXA3P55318 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AP000926.3-201ENST00000497201 299 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 SUMO1P1-201ENST00000497904 306 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXA3P55318 MLLT10P2-201ENST00000506434 249 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.82□□□□□ -2.12
FOXA3P55318 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.82□□□□□ -2.12
FOXA3P55318 AC002456.2-201ENST00000509356 380 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 SNORA31.21-201ENST00000517180 77 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AC109329.2-201ENST00000519658 482 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXA3P55318 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXA3P55318 EIF5A2P1-201ENST00000564027 460 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXA3P55318 MIR4658-201ENST00000584344 65 ntBASIC1.82□□□□□ -2.12
FOXA3P55318 RPS15AP11-201ENST00000594193 385 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms