Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.92□□□□□ -1.78
CLCN3P51790 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC009961.3-201ENST00000449832 765 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 RBMY2UP-201ENST00000453474 324 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 snoU109.4-201ENST00000458953 143 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC012170.1-201ENST00000495139 359 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 HSPD1P15-201ENST00000505573 1122 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC010625.1-201ENST00000511296 403 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.92□□□□□ -1.78
CLCN3P51790 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLCN3P51790 RFPL1S-203ENST00000539579 330 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC107954.1-201ENST00000565906 727 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCN3P51790 DUXAP11-201ENST00000603858 526 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 AL161756.2-201ENST00000604597 246 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCN3P51790 AL031667.3-201ENST00000620124 655 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCN3P51790 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CLCN3P51790 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCN3P51790 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCN3P51790 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCN3P51790 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.92□□□□□ -1.78
CLCN3P51790 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCN3P51790 MTND4P5-201ENST00000435821 1374 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CLCN3P51790 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.91□□□□□ -1.78
CLCN3P51790 RPL21P132-201ENST00000331267 462 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 FRG1CP-201ENST00000358464 769 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 RNU6-821P-201ENST00000390995 107 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 RNU6-837P-201ENST00000391056 108 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCN3P51790 RPS7P15-201ENST00000415804 584 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 AC017079.2-201ENST00000416102 485 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCN3P51790 AL590103.1-201ENST00000434488 307 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCN3P51790 HSPE1P28-201ENST00000443139 211 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCN3P51790 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCN3P51790 AL360221.1-201ENST00000445989 335 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 NDUFS5P3-201ENST00000450668 321 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 DNAJC19P1-201ENST00000455312 319 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 U3.44-201ENST00000458938 192 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 FAM172BP-201ENST00000487497 1089 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLCN3P51790 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCN3P51790 BTF3L4P4-201ENST00000506381 449 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCN3P51790 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCN3P51790 RNU6-150P-201ENST00000516237 95 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCN3P51790 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 AC007954.1-201ENST00000554198 494 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCN3P51790 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCN3P51790 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCN3P51790 KLKP1-201ENST00000595979 403 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 AC020914.4-201ENST00000597690 277 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 WISP1-OT1-201ENST00000602893 642 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCN3P51790 MIR7851-201ENST00000610611 160 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 HULC.1-201ENST00000612720 240 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCN3P51790 AL445264.1-201ENST00000621719 171 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
CLCN3P51790 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 AF246928.1-201ENST00000623768 87 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCN3P51790 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCN3P51790 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCN3P51790 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CLCN3P51790 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLCN3P51790 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLCN3P51790 OTUD4P1-201ENST00000237841 3067 ntBASIC3.91□□□□□ -1.78
CLCN3P51790 CR381670.1-201ENST00000624291 1693 ntBASIC3.9□□□□□ -1.78
CLCN3P51790 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLCN3P51790 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.78
CLCN3P51790 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLCN3P51790 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CLCN3P51790 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.9□□□□□ -1.78
CLCN3P51790 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CLCN3P51790 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLCN3P51790 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.9□□□□□ -1.78
CLCN3P51790 RNA5SP88-201ENST00000365560 109 ntBASIC3.9□□□□□ -1.79
CLCN3P51790 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLCN3P51790 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms