Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.59□□□□□ -1.83
LHX1P48742 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.59□□□□□ -1.83
LHX1P48742 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
LHX1P48742 ZNF542P-204ENST00000482727 1305 ntBASIC3.59□□□□□ -1.83
LHX1P48742 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
LHX1P48742 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.59□□□□□ -1.83
LHX1P48742 AC244517.1-201ENST00000606030 2086 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AL022578.1-201ENST00000439330 1433 ntBASIC3.59□□□□□ -1.84
LHX1P48742 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.59□□□□□ -1.84
LHX1P48742 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.59□□□□□ -1.84
LHX1P48742 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LHX1P48742 TNPO1P3-201ENST00000436471 2662 ntBASIC3.58□□□□□ -1.84
LHX1P48742 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LHX1P48742 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LHX1P48742 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.58□□□□□ -1.84
LHX1P48742 AL138880.1-201ENST00000405824 642 ntBASIC3.58□□□□□ -1.84
LHX1P48742 RNA5SP120-201ENST00000410900 112 ntBASIC3.58□□□□□ -1.84
LHX1P48742 AC092447.6-201ENST00000414578 210 ntBASIC3.58□□□□□ -1.84
LHX1P48742 AC127526.1-201ENST00000417526 366 ntBASIC3.58□□□□□ -1.84
LHX1P48742 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.58□□□□□ -1.84
LHX1P48742 MTCO2P5-201ENST00000422621 426 ntBASIC3.58□□□□□ -1.84
LHX1P48742 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.58□□□□□ -1.84
LHX1P48742 AC002075.2-201ENST00000425207 252 ntBASIC3.58□□□□□ -1.84
LHX1P48742 AC007742.1-201ENST00000425789 329 ntBASIC3.58□□□□□ -1.84
LHX1P48742 ELOCP26-201ENST00000436067 329 ntBASIC3.58□□□□□ -1.84
LHX1P48742 MTCYBP31-201ENST00000438855 1122 ntBASIC3.58□□□□□ -1.84
LHX1P48742 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.58□□□□□ -1.84
LHX1P48742 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.58□□□□□ -1.84
LHX1P48742 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.58□□□□□ -1.84
LHX1P48742 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.58□□□□□ -1.84
LHX1P48742 AP001992.1-205ENST00000462248 379 ntBASIC3.58□□□□□ -1.84
LHX1P48742 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.58□□□□□ -1.84
LHX1P48742 AC023424.2-201ENST00000493479 777 ntBASIC3.58□□□□□ -1.84
LHX1P48742 AC104685.1-201ENST00000502445 371 ntBASIC3.58□□□□□ -1.84
LHX1P48742 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.58□□□□□ -1.84
LHX1P48742 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.58□□□□□ -1.84
LHX1P48742 AC239860.2-201ENST00000525886 270 ntBASIC3.58□□□□□ -1.84
LHX1P48742 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.58□□□□□ -1.84
LHX1P48742 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.58□□□□□ -1.84
LHX1P48742 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.58□□□□□ -1.84
LHX1P48742 ELOCP32-201ENST00000548625 324 ntBASIC3.58□□□□□ -1.84
LHX1P48742 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.58□□□□□ -1.84
LHX1P48742 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.58□□□□□ -1.84
LHX1P48742 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.58□□□□□ -1.84
LHX1P48742 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.58□□□□□ -1.84
LHX1P48742 AL596327.1-201ENST00000603629 213 ntBASIC3.58□□□□□ -1.84
LHX1P48742 AC010738.1-201ENST00000604970 987 ntBASIC3.58□□□□□ -1.84
LHX1P48742 AC008147.4-201ENST00000617570 1204 ntBASIC3.58□□□□□ -1.84
LHX1P48742 AL713922.2-201ENST00000619384 716 ntBASIC3.58□□□□□ -1.84
LHX1P48742 U7.8-201ENST00000619968 63 ntBASIC3.58□□□□□ -1.84
LHX1P48742 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.58□□□□□ -1.84
LHX1P48742 CR383658.2-201ENST00000547576 1525 ntBASIC3.58□□□□□ -1.84
LHX1P48742 SGO1P2-201ENST00000429458 1589 ntBASIC3.58□□□□□ -1.84
LHX1P48742 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LHX1P48742 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LHX1P48742 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LHX1P48742 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LHX1P48742 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LHX1P48742 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
LHX1P48742 OR5H2-201ENST00000355273 945 ntBASIC3.57□□□□□ -1.84
LHX1P48742 RNA5SP197-201ENST00000363357 119 ntBASIC3.57□□□□□ -1.84
LHX1P48742 SNORA7.2-201ENST00000364446 145 ntBASIC3.57□□□□□ -1.84
LHX1P48742 RNU6-629P-201ENST00000384061 103 ntBASIC3.57□□□□□ -1.84
LHX1P48742 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
LHX1P48742 RNU6-952P-201ENST00000391164 108 ntBASIC3.57□□□□□ -1.84
LHX1P48742 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LHX1P48742 RNU6-712P-201ENST00000410558 100 ntBASIC3.57□□□□□ -1.84
LHX1P48742 PIGPP2-201ENST00000411569 458 ntBASIC3.57□□□□□ -1.84
LHX1P48742 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.57□□□□□ -1.84
LHX1P48742 HMGN1P24-201ENST00000412282 298 ntBASIC3.57□□□□□ -1.84
LHX1P48742 AC126124.2-201ENST00000413542 321 ntBASIC3.57□□□□□ -1.84
LHX1P48742 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.57□□□□□ -1.84
LHX1P48742 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.57□□□□□ -1.84
LHX1P48742 AL022400.1-201ENST00000423946 935 ntBASIC3.57□□□□□ -1.84
LHX1P48742 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.57□□□□□ -1.84
LHX1P48742 TXNL1P1-201ENST00000429528 554 ntBASIC3.57□□□□□ -1.84
LHX1P48742 RPL21P112-201ENST00000434403 463 ntBASIC3.57□□□□□ -1.84
LHX1P48742 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.57□□□□□ -1.84
LHX1P48742 SNRPEP7-201ENST00000438350 220 ntBASIC3.57□□□□□ -1.84
LHX1P48742 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
LHX1P48742 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.57□□□□□ -1.84
LHX1P48742 EEF1E1P1-201ENST00000446998 430 ntBASIC3.57□□□□□ -1.84
LHX1P48742 RPS4XP5-202ENST00000449995 1334 ntBASIC3.57□□□□□ -1.84
LHX1P48742 COX7A2P2-201ENST00000505291 250 ntBASIC3.57□□□□□ -1.84
LHX1P48742 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.57□□□□□ -1.84
LHX1P48742 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.57□□□□□ -1.84
LHX1P48742 AC005921.1-201ENST00000510589 286 ntBASIC3.57□□□□□ -1.84
LHX1P48742 AC107934.2-201ENST00000518653 310 ntBASIC3.57□□□□□ -1.84
LHX1P48742 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
LHX1P48742 AL121603.1-201ENST00000553815 142 ntBASIC3.57□□□□□ -1.84
LHX1P48742 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.57□□□□□ -1.84
LHX1P48742 MIR4999-201ENST00000585029 91 ntBASIC3.57□□□□□ -1.84
LHX1P48742 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.57□□□□□ -1.84
LHX1P48742 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.57□□□□□ -1.84
LHX1P48742 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.57□□□□□ -1.84
LHX1P48742 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.57□□□□□ -1.84
LHX1P48742 BBIP1P1-201ENST00000602999 279 ntBASIC3.57□□□□□ -1.84
LHX1P48742 XIAPP1-201ENST00000603162 600 ntBASIC3.57□□□□□ -1.84
LHX1P48742 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.57□□□□□ -1.84
LHX1P48742 MIR8058-201ENST00000615737 89 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms