Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.87□□□□□ -1.95
RFX3P48380 HMGB1P5-201ENST00000255320 642 ntBASIC2.87□□□□□ -1.95
RFX3P48380 SNORA14A-201ENST00000364773 135 ntBASIC2.87□□□□□ -1.95
RFX3P48380 RPS15AP38-201ENST00000413110 372 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX3P48380 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.87□□□□□ -1.95
RFX3P48380 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX3P48380 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.87□□□□□ -1.95
RFX3P48380 AC092634.2-201ENST00000428146 1010 ntBASIC2.87□□□□□ -1.95
RFX3P48380 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.87□□□□□ -1.95
RFX3P48380 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX3P48380 OR2B8P-201ENST00000432841 938 ntBASIC2.87□□□□□ -1.95
RFX3P48380 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX3P48380 AC016696.1-201ENST00000446949 318 ntBASIC2.87□□□□□ -1.95
RFX3P48380 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.87□□□□□ -1.95
RFX3P48380 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX3P48380 RPS26P21-201ENST00000475397 348 ntBASIC2.87□□□□□ -1.95
RFX3P48380 BOLA3P3-201ENST00000505182 232 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AC006390.1-201ENST00000508068 283 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RFX3P48380 SNORA31.1-201ENST00000515993 133 ntBASIC2.87□□□□□ -1.95
RFX3P48380 SNORA31.5-201ENST00000516190 133 ntBASIC2.87□□□□□ -1.95
RFX3P48380 RN7SKP282-201ENST00000516824 299 ntBASIC2.87□□□□□ -1.95
RFX3P48380 SNORA48.10-201ENST00000516965 160 ntBASIC2.87□□□□□ -1.95
RFX3P48380 snoZ278.1-201ENST00000517059 112 ntBASIC2.87□□□□□ -1.95
RFX3P48380 MTND1P36-201ENST00000522384 936 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AC239860.2-201ENST00000525886 270 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.87□□□□□ -1.95
RFX3P48380 MTCYBP27-201ENST00000555160 670 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX3P48380 AC006116.7-201ENST00000590141 756 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AP002802.2-201ENST00000605877 235 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AP000238.1-201ENST00000608759 426 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AC106028.5-201ENST00000610332 395 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AL442067.2-201ENST00000614033 363 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AC138932.5-201ENST00000617759 563 ntBASIC2.87□□□□□ -1.95
RFX3P48380 AC006111.3-201ENST00000622137 383 ntBASIC2.87□□□□□ -1.95
RFX3P48380 MTCO1P23-201ENST00000415223 1526 ntBASIC2.87□□□□□ -1.95
RFX3P48380 GDI2P1-201ENST00000429312 1336 ntBASIC2.87□□□□□ -1.95
RFX3P48380 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFX3P48380 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFX3P48380 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.86□□□□□ -1.95
RFX3P48380 AL035405.1-201ENST00000400795 710 ntBASIC2.86□□□□□ -1.95
RFX3P48380 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.86□□□□□ -1.95
RFX3P48380 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX3P48380 BMS1P22-201ENST00000414726 313 ntBASIC2.86□□□□□ -1.95
RFX3P48380 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.86□□□□□ -1.95
RFX3P48380 AC091390.3-201ENST00000426478 338 ntBASIC2.86□□□□□ -1.95
RFX3P48380 RPL23AP69-201ENST00000431134 458 ntBASIC2.86□□□□□ -1.95
RFX3P48380 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX3P48380 GAPDHP27-201ENST00000447427 1020 ntBASIC2.86□□□□□ -1.95
RFX3P48380 MTCO1P48-201ENST00000448024 1096 ntBASIC2.86□□□□□ -1.95
RFX3P48380 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.86□□□□□ -1.95
RFX3P48380 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX3P48380 NAMPTP2-201ENST00000505629 1115 ntBASIC2.86□□□□□ -1.95
RFX3P48380 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RFX3P48380 RNA5SP385-201ENST00000515947 110 ntBASIC2.86□□□□□ -1.95
RFX3P48380 AC023632.1-201ENST00000518463 375 ntBASIC2.86□□□□□ -1.95
RFX3P48380 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX3P48380 AC104417.1-201ENST00000523974 751 ntBASIC2.86□□□□□ -1.95
RFX3P48380 AP003066.2-201ENST00000529375 555 ntBASIC2.86□□□□□ -1.95
RFX3P48380 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.86□□□□□ -1.95
RFX3P48380 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.86□□□□□ -1.95
RFX3P48380 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.86□□□□□ -1.95
RFX3P48380 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.86□□□□□ -1.95
RFX3P48380 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFX3P48380 AC008507.2-201ENST00000588402 1176 ntBASIC2.86□□□□□ -1.95
RFX3P48380 AC090330.1-201ENST00000588646 764 ntBASIC2.86□□□□□ -1.95
RFX3P48380 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX3P48380 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.86□□□□□ -1.95
RFX3P48380 AC010738.1-201ENST00000604970 987 ntBASIC2.86□□□□□ -1.95
RFX3P48380 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.86□□□□□ -1.95
RFX3P48380 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFX3P48380 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX3P48380 AC091953.5-201ENST00000622919 233 ntBASIC2.86□□□□□ -1.95
RFX3P48380 AC080188.3-201ENST00000624842 748 ntBASIC2.86□□□□□ -1.95
RFX3P48380 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFX3P48380 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFX3P48380 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
RFX3P48380 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFX3P48380 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
RFX3P48380 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RFX3P48380 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RFX3P48380 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.85□□□□□ -1.95
RFX3P48380 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RFX3P48380 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RFX3P48380 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RFX3P48380 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RFX3P48380 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.85□□□□□ -1.95
RFX3P48380 SNORD51-201ENST00000384320 80 ntBASIC2.85□□□□□ -1.95
RFX3P48380 MCTS2P-201ENST00000394552 546 ntBASIC2.85□□□□□ -1.95
RFX3P48380 RPS3AP26-201ENST00000398259 784 ntBASIC2.85□□□□□ -1.95
RFX3P48380 RNU4-47P-201ENST00000410876 114 ntBASIC2.85□□□□□ -1.95
RFX3P48380 AL024507.1-201ENST00000412741 274 ntBASIC2.85□□□□□ -1.95
RFX3P48380 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.85□□□□□ -1.95
RFX3P48380 RPL7P30-201ENST00000420888 709 ntBASIC2.85□□□□□ -1.95
RFX3P48380 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.85□□□□□ -1.95
RFX3P48380 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.85□□□□□ -1.95
RFX3P48380 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.85□□□□□ -1.95
RFX3P48380 OR6K5P-201ENST00000447050 945 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms