Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 SUMO2P2-201ENST00000456482 255 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXA13P31271 snoU13.3-201ENST00000459441 104 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXA13P31271 AC092045.1-201ENST00000495716 1231 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA13P31271 FCF1P8-201ENST00000510322 597 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXA13P31271 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA13P31271 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXA13P31271 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXA13P31271 EEF1B2P4-201ENST00000551398 348 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA13P31271 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXA13P31271 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA13P31271 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXA13P31271 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA13P31271 SNRPGP15-201ENST00000600149 222 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 AL109653.1-201ENST00000603091 248 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 AL596327.1-201ENST00000603629 213 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 HMGB1P50-201ENST00000605814 607 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 AC022149.2-201ENST00000621061 203 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA13P31271 CR381572.1-201ENST00000625098 102 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA13P31271 AC138649.5-201ENST00000637456 137 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 AC095050.2-201ENST00000510748 1458 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXA13P31271 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA13P31271 AC032011.1-201ENST00000611703 1549 ntBASIC3.89□□□□□ -1.79
HOXA13P31271 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA13P31271 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA13P31271 OR4G11P-202ENST00000642116 1414 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXA13P31271 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXA13P31271 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HOXA13P31271 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 Y_RNA.18-201ENST00000362461 102 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 RNU6-952P-201ENST00000391164 108 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 PIGPP2-201ENST00000411569 458 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 Z99755.1-201ENST00000414048 380 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 TPMTP2-201ENST00000414372 726 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXA13P31271 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXA13P31271 MTND4P32-201ENST00000437189 1237 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 MTND5P2-201ENST00000442927 1142 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 PAXBP1P1-201ENST00000449315 447 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXA13P31271 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXA13P31271 USP9YP10-201ENST00000454868 628 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 AC017015.1-201ENST00000477387 286 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 BET1P1-201ENST00000482276 359 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXA13P31271 AC105313.1-201ENST00000509121 353 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 USP9YP5-201ENST00000511770 630 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 MRPS33P3-201ENST00000513456 322 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 IGHV3-32-201ENST00000519182 355 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 AP004371.1-201ENST00000525240 214 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXA13P31271 AL356057.1-201ENST00000533798 831 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXA13P31271 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXA13P31271 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 AP005136.1-201ENST00000579765 429 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 MIR4276-201ENST00000584832 70 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 AL162713.1-201ENST00000604480 262 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 AC128687.1-201ENST00000605304 619 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 AC055876.5-201ENST00000605667 259 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 RNU6-88P-201ENST00000606801 100 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXA13P31271 AL451064.1-201ENST00000607718 471 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXA13P31271 AL356596.1-201ENST00000624230 379 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 CRYM-AS1-204ENST00000637983 556 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 MFSD8-233ENST00000641482 4860 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 AC073346.2-201ENST00000624724 2058 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA13P31271 MTND4P34-201ENST00000572715 1371 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 USP8P1-201ENST00000494673 3183 ntBASIC3.88□□□□□ -1.79
HOXA13P31271 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA13P31271 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HOXA13P31271 AC027287.1-201ENST00000553115 1453 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA13P31271 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HOXA13P31271 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HOXA13P31271 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA13P31271 SNORA9-201ENST00000384215 133 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AL583834.1-201ENST00000406943 343 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms