Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL355472.4-201ENST00000610233 626 ntBASIC5.86□□□□□ -1.47
RXRBP28702 AC009161.2-201ENST00000624626 138 ntBASIC5.86□□□□□ -1.47
RXRBP28702 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.86□□□□□ -1.47
RXRBP28702 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RXRBP28702 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
RXRBP28702 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
RXRBP28702 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RXRBP28702 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RXRBP28702 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RXRBP28702 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RXRBP28702 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RXRBP28702 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RXRBP28702 AC009229.4-201ENST00000623854 1947 ntBASIC5.86□□□□□ -1.47
RXRBP28702 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RXRBP28702 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RXRBP28702 MTCO1P7-201ENST00000419523 1542 ntBASIC5.85□□□□□ -1.47
RXRBP28702 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RXRBP28702 AC009643.2-201ENST00000603543 1448 ntBASIC5.85□□□□□ -1.47
RXRBP28702 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RXRBP28702 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.85□□□□□ -1.47
RXRBP28702 AL133243.3-201ENST00000617415 3004 ntBASIC5.85□□□□□ -1.47
RXRBP28702 RNU6-1309P-201ENST00000363305 108 ntBASIC5.85□□□□□ -1.47
RXRBP28702 OR52E6-202ENST00000379946 954 ntBASIC5.85□□□□□ -1.47
RXRBP28702 RNU6-657P-201ENST00000383904 107 ntBASIC5.85□□□□□ -1.47
RXRBP28702 RNU6-456P-201ENST00000384493 107 ntBASIC5.85□□□□□ -1.47
RXRBP28702 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.85□□□□□ -1.47
RXRBP28702 AL645937.1-202ENST00000421799 937 ntBASIC5.85□□□□□ -1.47
RXRBP28702 REREP1Y-201ENST00000422655 198 ntBASIC5.85□□□□□ -1.47
RXRBP28702 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.85□□□□□ -1.47
RXRBP28702 REREP2Y-201ENST00000439103 200 ntBASIC5.85□□□□□ -1.47
RXRBP28702 MRPS17P3-201ENST00000465453 385 ntBASIC5.85□□□□□ -1.47
RXRBP28702 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.85□□□□□ -1.47
RXRBP28702 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.85□□□□□ -1.47
RXRBP28702 AC099522.1-202ENST00000514718 367 ntBASIC5.85□□□□□ -1.47
RXRBP28702 SNORD60.2-201ENST00000516883 86 ntBASIC5.85□□□□□ -1.47
RXRBP28702 RNU6-1314P-201ENST00000517139 104 ntBASIC5.85□□□□□ -1.47
RXRBP28702 AP001284.1-201ENST00000528393 2118 ntBASIC5.85□□□□□ -1.47
RXRBP28702 FKBP1BP1-201ENST00000553366 325 ntBASIC5.85□□□□□ -1.47
RXRBP28702 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.85□□□□□ -1.47
RXRBP28702 AC009852.2-201ENST00000567898 485 ntBASIC5.85□□□□□ -1.47
RXRBP28702 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.85□□□□□ -1.47
RXRBP28702 AC090312.2-201ENST00000582687 378 ntBASIC5.85□□□□□ -1.47
RXRBP28702 AC079587.1-201ENST00000603846 277 ntBASIC5.85□□□□□ -1.47
RXRBP28702 AL080274.1-201ENST00000605565 220 ntBASIC5.85□□□□□ -1.47
RXRBP28702 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.85□□□□□ -1.47
RXRBP28702 MIR7973-1-201ENST00000614683 76 ntBASIC5.85□□□□□ -1.47
RXRBP28702 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.85□□□□□ -1.47
RXRBP28702 AL034408.1-202ENST00000636088 415 ntBASIC5.85□□□□□ -1.47
RXRBP28702 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RXRBP28702 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RXRBP28702 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.85□□□□□ -1.47
RXRBP28702 AP001273.1-201ENST00000624493 3152 ntBASIC5.85□□□□□ -1.47
RXRBP28702 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.85□□□□□ -1.47
RXRBP28702 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RXRBP28702 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RXRBP28702 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RXRBP28702 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.85□□□□□ -1.47
RXRBP28702 AL391684.1-202ENST00000641293 1636 ntBASIC5.85□□□□□ -1.47
RXRBP28702 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RXRBP28702 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RXRBP28702 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.84□□□□□ -1.47
RXRBP28702 RIOK3P1-201ENST00000418778 1528 ntBASIC5.84□□□□□ -1.47
RXRBP28702 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
RXRBP28702 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RXRBP28702 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.84□□□□□ -1.47
RXRBP28702 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
RXRBP28702 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.84□□□□□ -1.47
RXRBP28702 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RXRBP28702 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.84□□□□□ -1.47
RXRBP28702 Y_RNA.46-201ENST00000362695 102 ntBASIC5.84□□□□□ -1.47
RXRBP28702 RNU6-1120P-201ENST00000362988 108 ntBASIC5.84□□□□□ -1.47
RXRBP28702 RNU4-1-201ENST00000363925 141 ntBASIC5.84□□□□□ -1.47
RXRBP28702 RNU6-115P-201ENST00000364310 107 ntBASIC5.84□□□□□ -1.47
RXRBP28702 SNORA22B-201ENST00000383876 138 ntBASIC5.84□□□□□ -1.47
RXRBP28702 MIR183-201ENST00000384958 110 ntBASIC5.84□□□□□ -1.47
RXRBP28702 NDUFB4P5-201ENST00000415445 361 ntBASIC5.84□□□□□ -1.47
RXRBP28702 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.84□□□□□ -1.47
RXRBP28702 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.84□□□□□ -1.47
RXRBP28702 FTLP19-201ENST00000433300 394 ntBASIC5.84□□□□□ -1.47
RXRBP28702 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.84□□□□□ -1.47
RXRBP28702 CACYBPP2-201ENST00000453625 678 ntBASIC5.84□□□□□ -1.47
RXRBP28702 RNU6-1208P-201ENST00000459588 107 ntBASIC5.84□□□□□ -1.47
RXRBP28702 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.84□□□□□ -1.47
RXRBP28702 AC090136.1-201ENST00000520009 240 ntBASIC5.84□□□□□ -1.47
RXRBP28702 COX6CP5-201ENST00000527162 228 ntBASIC5.84□□□□□ -1.47
RXRBP28702 AC018630.1-201ENST00000541376 925 ntBASIC5.84□□□□□ -1.47
RXRBP28702 AC005668.1-201ENST00000571142 476 ntBASIC5.84□□□□□ -1.47
RXRBP28702 AL355598.1-201ENST00000604169 202 ntBASIC5.84□□□□□ -1.47
RXRBP28702 AC010632.3-201ENST00000611377 369 ntBASIC5.84□□□□□ -1.47
RXRBP28702 AL354798.1-201ENST00000622505 329 ntBASIC5.84□□□□□ -1.47
RXRBP28702 ZNF285B-201ENST00000561698 1767 ntBASIC5.84□□□□□ -1.47
RXRBP28702 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RXRBP28702 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RXRBP28702 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.84□□□□□ -1.47
RXRBP28702 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RXRBP28702 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RXRBP28702 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RXRBP28702 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
RXRBP28702 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RXRBP28702 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms