Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RPL7AP73-201ENST00000413490 353 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 BX510359.2-201ENST00000417920 305 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 AC068533.1-201ENST00000418542 415 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 EIF1P3-201ENST00000423841 334 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 RAC1P6-201ENST00000423911 575 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 AC012498.1-201ENST00000424037 437 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 COX6CP13-201ENST00000428703 226 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.66□□□□□ -1.5
ERCC3P19447 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.66□□□□□ -1.5
ERCC3P19447 CYCSP43-201ENST00000438233 310 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.66□□□□□ -1.5
ERCC3P19447 MTND4P25-201ENST00000441039 533 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.66□□□□□ -1.5
ERCC3P19447 AL359073.1-201ENST00000448036 403 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 TPT1P12-201ENST00000448968 492 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 NDUFS5P3-201ENST00000450668 321 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 snoU13.1-201ENST00000459157 104 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 MRPS17P3-201ENST00000465453 385 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 RPS27AP1-201ENST00000475545 471 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.66□□□□□ -1.5
ERCC3P19447 RPL23AP55-201ENST00000498163 452 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 EIF4EP3-201ENST00000498782 656 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 MLLT10P2-201ENST00000506434 249 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 AC111000.3-201ENST00000508057 576 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 RNU6-1092P-201ENST00000516955 87 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.66□□□□□ -1.5
ERCC3P19447 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.66□□□□□ -1.5
ERCC3P19447 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.66□□□□□ -1.5
ERCC3P19447 AC010525.2-201ENST00000590920 195 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 AL035413.2-201ENST00000604801 525 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.66□□□□□ -1.5
ERCC3P19447 AC233309.1-201ENST00000619522 751 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ERCC3P19447 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ERCC3P19447 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.66□□□□□ -1.5
ERCC3P19447 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ERCC3P19447 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.66□□□□□ -1.5
ERCC3P19447 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ERCC3P19447 MAPK10-349ENST00000641767 3661 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 NEAT1-202ENST00000501122 22743 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC3P19447 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC3P19447 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC3P19447 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ERCC3P19447 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC3P19447 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC3P19447 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC3P19447 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ERCC3P19447 CBX3P1-201ENST00000325243 554 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 RNU6-1284P-201ENST00000363701 100 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 RNU6-882P-201ENST00000391025 103 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 SNORA48.4-201ENST00000391089 134 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 AL035079.1-201ENST00000405210 287 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 RNU6-373P-201ENST00000411247 98 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 AC114491.1-201ENST00000416095 246 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 AC079780.1-201ENST00000428259 207 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 RPL23AP43-201ENST00000446445 471 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 FABP5P13-201ENST00000452144 328 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 S100A11P1-201ENST00000477525 312 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 VN1R104P-201ENST00000505115 1009 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC3P19447 AC105417.1-201ENST00000514691 285 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 SNORD27.1-201ENST00000516319 72 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 RNA5SP360-201ENST00000516555 118 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 SNORD60.2-201ENST00000516883 86 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC3P19447 AC018630.1-201ENST00000541376 925 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 AC093012.1-202ENST00000549403 582 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC3P19447 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.65□□□□□ -1.5
ERCC3P19447 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC3P19447 RN7SL690P-201ENST00000582087 240 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 RN7SL435P-201ENST00000584418 282 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 AC019193.2-201ENST00000610012 634 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.65□□□□□ -1.5
ERCC3P19447 MIR6853-201ENST00000619642 74 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 AC104985.2-201ENST00000620598 500 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 AC079684.1-201ENST00000621405 437 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 AC138649.5-201ENST00000637456 137 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 AL356489.2-201ENST00000566968 3528 ntBASIC5.65□□□□□ -1.5
ERCC3P19447 AL391684.1-202ENST00000641293 1636 ntBASIC5.65□□□□□ -1.51
ERCC3P19447 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC3P19447 MTND4P29-201ENST00000503122 1372 ntBASIC5.65□□□□□ -1.51
ERCC3P19447 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC3P19447 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC3P19447 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC3P19447 RIOK3P1-201ENST00000418778 1528 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC3P19447 XIAPP3-201ENST00000312918 795 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 RPL7P26-201ENST00000333817 754 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 RPL32P3-201ENST00000359025 275 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 RNU6-797P-201ENST00000363101 109 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 RNU6-701P-201ENST00000384059 107 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 RNU6-1009P-201ENST00000390996 107 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 AL354719.1-201ENST00000406535 843 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC3P19447 RNA5SP118-201ENST00000410385 109 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 RSU1P3-201ENST00000412878 835 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC3P19447 SNRPFP1-201ENST00000414761 252 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms