Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 Z92846.1-201ENST00000456203 268 ntBASIC4.72□□□□□ -1.65
ATF4P18848 Y_RNA.635-201ENST00000459041 101 ntBASIC4.72□□□□□ -1.65
ATF4P18848 AL591473.1-201ENST00000464297 313 ntBASIC4.72□□□□□ -1.65
ATF4P18848 HMGN1P16-201ENST00000508308 283 ntBASIC4.72□□□□□ -1.65
ATF4P18848 AC018797.1-201ENST00000510791 255 ntBASIC4.72□□□□□ -1.65
ATF4P18848 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.72□□□□□ -1.65
ATF4P18848 RNA5SP468-201ENST00000516782 93 ntBASIC4.72□□□□□ -1.65
ATF4P18848 RNU6-566P-201ENST00000516790 107 ntBASIC4.72□□□□□ -1.65
ATF4P18848 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.72□□□□□ -1.65
ATF4P18848 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.72□□□□□ -1.65
ATF4P18848 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.72□□□□□ -1.65
ATF4P18848 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.72□□□□□ -1.65
ATF4P18848 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.72□□□□□ -1.65
ATF4P18848 AL513327.3-201ENST00000602618 469 ntBASIC4.72□□□□□ -1.65
ATF4P18848 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.72□□□□□ -1.65
ATF4P18848 AL161798.1-201ENST00000604630 131 ntBASIC4.72□□□□□ -1.65
ATF4P18848 AC135507.2-201ENST00000612443 309 ntBASIC4.72□□□□□ -1.65
ATF4P18848 AL021918.2-201ENST00000613415 194 ntBASIC4.72□□□□□ -1.65
ATF4P18848 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATF4P18848 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.72□□□□□ -1.65
ATF4P18848 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF4P18848 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
ATF4P18848 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.72□□□□□ -1.65
ATF4P18848 AC100778.3-201ENST00000580060 1750 ntBASIC4.72□□□□□ -1.65
ATF4P18848 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF4P18848 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.72□□□□□ -1.65
ATF4P18848 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
ATF4P18848 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.72□□□□□ -1.65
ATF4P18848 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF4P18848 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ATF4P18848 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
ATF4P18848 MARK2P15-201ENST00000432204 2186 ntBASIC4.71□□□□□ -1.65
ATF4P18848 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ATF4P18848 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATF4P18848 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATF4P18848 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATF4P18848 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATF4P18848 RNA5SP232-201ENST00000364144 119 ntBASIC4.71□□□□□ -1.66
ATF4P18848 Y_RNA.474-201ENST00000384341 102 ntBASIC4.71□□□□□ -1.66
ATF4P18848 RNA5SP239-201ENST00000410218 129 ntBASIC4.71□□□□□ -1.66
ATF4P18848 VN1R36P-201ENST00000414936 291 ntBASIC4.71□□□□□ -1.66
ATF4P18848 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.71□□□□□ -1.66
ATF4P18848 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.71□□□□□ -1.66
ATF4P18848 SAR1AP4-201ENST00000429225 591 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AC007919.1-201ENST00000429380 217 ntBASIC4.71□□□□□ -1.66
ATF4P18848 FTH1P6-201ENST00000430768 320 ntBASIC4.71□□□□□ -1.66
ATF4P18848 GPM6BP2-201ENST00000432046 144 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 GAPDHP48-201ENST00000436626 961 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.71□□□□□ -1.66
ATF4P18848 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.71□□□□□ -1.66
ATF4P18848 AC019185.1-201ENST00000442718 389 ntBASIC4.71□□□□□ -1.66
ATF4P18848 GPM6BP1-201ENST00000446387 144 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.71□□□□□ -1.66
ATF4P18848 RPL31P15-201ENST00000449770 338 ntBASIC4.71□□□□□ -1.66
ATF4P18848 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.71□□□□□ -1.66
ATF4P18848 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.71□□□□□ -1.66
ATF4P18848 RNU2-58P-201ENST00000516403 183 ntBASIC4.71□□□□□ -1.66
ATF4P18848 RNA5SP290-201ENST00000517133 127 ntBASIC4.71□□□□□ -1.66
ATF4P18848 RNU6-1315P-201ENST00000517187 99 ntBASIC4.71□□□□□ -1.66
ATF4P18848 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.71□□□□□ -1.66
ATF4P18848 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.71□□□□□ -1.66
ATF4P18848 OR5D17P-201ENST00000531492 978 ntBASIC4.71□□□□□ -1.66
ATF4P18848 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.71□□□□□ -1.66
ATF4P18848 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.71□□□□□ -1.66
ATF4P18848 AC004024.1-201ENST00000549244 247 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.71□□□□□ -1.66
ATF4P18848 AC051619.2-201ENST00000559063 397 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AC022884.2-201ENST00000578535 580 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.71□□□□□ -1.66
ATF4P18848 MIR1273C-201ENST00000578669 77 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.71□□□□□ -1.66
ATF4P18848 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 AC106900.2-201ENST00000604994 317 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AC145423.1-201ENST00000605712 336 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AL050343.2-201ENST00000607338 280 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AL121612.2-201ENST00000612261 482 ntBASIC4.71□□□□□ -1.66
ATF4P18848 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 AC025574.2-201ENST00000615621 514 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.71□□□□□ -1.66
ATF4P18848 AL137067.2-201ENST00000621202 131 ntBASIC4.71□□□□□ -1.66
ATF4P18848 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 MIR1910-201ENST00000636955 80 ntBASIC4.71□□□□□ -1.66
ATF4P18848 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATF4P18848 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATF4P18848 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATF4P18848 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATF4P18848 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ATF4P18848 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.71□□□□□ -1.66
ATF4P18848 RPS4XP5-202ENST00000449995 1334 ntBASIC4.71□□□□□ -1.66
ATF4P18848 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms