Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.46□□□□□ -1.85
KRT3P12035 AF117829.1-206ENST00000621883 3802 ntBASIC3.46□□□□□ -1.86
KRT3P12035 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
KRT3P12035 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KRT3P12035 RNU1-70P-201ENST00000362618 164 ntBASIC3.46□□□□□ -1.86
KRT3P12035 DEFB109C-201ENST00000382575 264 ntBASIC3.46□□□□□ -1.86
KRT3P12035 DEFB109B-201ENST00000382656 264 ntBASIC3.46□□□□□ -1.86
KRT3P12035 MIR449B-201ENST00000384995 97 ntBASIC3.46□□□□□ -1.86
KRT3P12035 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
KRT3P12035 AL583834.1-201ENST00000406943 343 ntBASIC3.46□□□□□ -1.86
KRT3P12035 RNU6-757P-201ENST00000410334 100 ntBASIC3.46□□□□□ -1.86
KRT3P12035 RNA5SP107-201ENST00000411358 122 ntBASIC3.46□□□□□ -1.86
KRT3P12035 USP9YP33-201ENST00000412220 421 ntBASIC3.46□□□□□ -1.86
KRT3P12035 OR1AA1P-201ENST00000419597 916 ntBASIC3.46□□□□□ -1.86
KRT3P12035 AC069157.1-201ENST00000421749 137 ntBASIC3.46□□□□□ -1.86
KRT3P12035 AC019178.2-201ENST00000423595 505 ntBASIC3.46□□□□□ -1.86
KRT3P12035 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.46□□□□□ -1.86
KRT3P12035 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.46□□□□□ -1.86
KRT3P12035 RPS25P9-201ENST00000435591 252 ntBASIC3.46□□□□□ -1.86
KRT3P12035 USP9YP35-201ENST00000435696 412 ntBASIC3.46□□□□□ -1.86
KRT3P12035 HMGN2P20-201ENST00000437531 273 ntBASIC3.46□□□□□ -1.86
KRT3P12035 CST9LP2-201ENST00000437612 320 ntBASIC3.46□□□□□ -1.86
KRT3P12035 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.46□□□□□ -1.86
KRT3P12035 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.46□□□□□ -1.86
KRT3P12035 RPL18AP17-201ENST00000455326 198 ntBASIC3.46□□□□□ -1.86
KRT3P12035 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.46□□□□□ -1.86
KRT3P12035 ARPC3P2-201ENST00000457786 533 ntBASIC3.46□□□□□ -1.86
KRT3P12035 AC026410.2-201ENST00000460281 156 ntBASIC3.46□□□□□ -1.86
KRT3P12035 AL024509.2-201ENST00000493462 493 ntBASIC3.46□□□□□ -1.86
KRT3P12035 AP002812.1-201ENST00000495378 474 ntBASIC3.46□□□□□ -1.86
KRT3P12035 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.46□□□□□ -1.86
KRT3P12035 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.46□□□□□ -1.86
KRT3P12035 TXNP6-201ENST00000510190 310 ntBASIC3.46□□□□□ -1.86
KRT3P12035 AC010625.1-201ENST00000511296 403 ntBASIC3.46□□□□□ -1.86
KRT3P12035 RNU6-150P-201ENST00000516237 95 ntBASIC3.46□□□□□ -1.86
KRT3P12035 AC104986.1-201ENST00000517978 436 ntBASIC3.46□□□□□ -1.86
KRT3P12035 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.46□□□□□ -1.86
KRT3P12035 AL163153.1-201ENST00000554223 283 ntBASIC3.46□□□□□ -1.86
KRT3P12035 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.46□□□□□ -1.86
KRT3P12035 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.46□□□□□ -1.86
KRT3P12035 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.46□□□□□ -1.86
KRT3P12035 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.46□□□□□ -1.86
KRT3P12035 AC011330.2-201ENST00000621680 635 ntBASIC3.46□□□□□ -1.86
KRT3P12035 AC091925.2-201ENST00000625059 256 ntBASIC3.46□□□□□ -1.86
KRT3P12035 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.46□□□□□ -1.86
KRT3P12035 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
KRT3P12035 AL049781.1-201ENST00000623195 3585 ntBASIC3.46□□□□□ -1.86
KRT3P12035 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KRT3P12035 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KRT3P12035 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.46□□□□□ -1.86
KRT3P12035 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KRT3P12035 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.46□□□□□ -1.86
KRT3P12035 Z83843.1-201ENST00000604070 3685 ntBASIC3.46□□□□□ -1.86
KRT3P12035 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
KRT3P12035 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
KRT3P12035 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.45□□□□□ -1.86
KRT3P12035 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
KRT3P12035 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
KRT3P12035 AP000568.1-201ENST00000282964 442 ntBASIC3.45□□□□□ -1.86
KRT3P12035 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.45□□□□□ -1.86
KRT3P12035 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KRT3P12035 MIR1284-201ENST00000408337 120 ntBASIC3.45□□□□□ -1.86
KRT3P12035 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.45□□□□□ -1.86
KRT3P12035 HMGN1P24-201ENST00000412282 298 ntBASIC3.45□□□□□ -1.86
KRT3P12035 RPS7P15-201ENST00000415804 584 ntBASIC3.45□□□□□ -1.86
KRT3P12035 HIGD1AP15-201ENST00000416198 280 ntBASIC3.45□□□□□ -1.86
KRT3P12035 ELOCP9-201ENST00000418624 239 ntBASIC3.45□□□□□ -1.86
KRT3P12035 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.45□□□□□ -1.86
KRT3P12035 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.45□□□□□ -1.86
KRT3P12035 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.45□□□□□ -1.86
KRT3P12035 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.45□□□□□ -1.86
KRT3P12035 AC005019.1-201ENST00000436455 431 ntBASIC3.45□□□□□ -1.86
KRT3P12035 MTND4P6-201ENST00000438297 472 ntBASIC3.45□□□□□ -1.86
KRT3P12035 ISCA1P2-201ENST00000438679 421 ntBASIC3.45□□□□□ -1.86
KRT3P12035 MTND2P20-201ENST00000440805 661 ntBASIC3.45□□□□□ -1.86
KRT3P12035 HSPE1P28-201ENST00000443139 211 ntBASIC3.45□□□□□ -1.86
KRT3P12035 Z99127.3-201ENST00000448158 395 ntBASIC3.45□□□□□ -1.86
KRT3P12035 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.45□□□□□ -1.86
KRT3P12035 SNORD11.1-201ENST00000459482 85 ntBASIC3.45□□□□□ -1.86
KRT3P12035 RPL21P10-201ENST00000463521 490 ntBASIC3.45□□□□□ -1.86
KRT3P12035 RPS4XP10-201ENST00000465034 731 ntBASIC3.45□□□□□ -1.86
KRT3P12035 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.45□□□□□ -1.86
KRT3P12035 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KRT3P12035 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.45□□□□□ -1.86
KRT3P12035 RPL7P38-201ENST00000488396 739 ntBASIC3.45□□□□□ -1.86
KRT3P12035 AC023424.2-201ENST00000493479 777 ntBASIC3.45□□□□□ -1.86
KRT3P12035 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.45□□□□□ -1.86
KRT3P12035 AC021678.1-201ENST00000505195 936 ntBASIC3.45□□□□□ -1.86
KRT3P12035 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.45□□□□□ -1.86
KRT3P12035 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.45□□□□□ -1.86
KRT3P12035 AC022861.1-201ENST00000522981 663 ntBASIC3.45□□□□□ -1.86
KRT3P12035 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.45□□□□□ -1.86
KRT3P12035 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.45□□□□□ -1.86
KRT3P12035 AC011611.1-201ENST00000552179 197 ntBASIC3.45□□□□□ -1.86
KRT3P12035 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.45□□□□□ -1.86
KRT3P12035 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.45□□□□□ -1.86
KRT3P12035 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.45□□□□□ -1.86
KRT3P12035 AC008507.1-201ENST00000587506 734 ntBASIC3.45□□□□□ -1.86
KRT3P12035 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.45□□□□□ -1.86
KRT3P12035 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms