Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.53□□□□□ -2
MT-ND4P03905 AC092447.6-201ENST00000414578 210 ntBASIC2.53□□□□□ -2
MT-ND4P03905 TMSB4XP6-201ENST00000415187 135 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC092634.6-201ENST00000418558 192 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND4P03905 AL353678.1-201ENST00000422735 741 ntBASIC2.53□□□□□ -2
MT-ND4P03905 TMSB4XP1-201ENST00000424567 135 ntBASIC2.53□□□□□ -2
MT-ND4P03905 RAC1P8-201ENST00000427086 527 ntBASIC2.53□□□□□ -2
MT-ND4P03905 Z93242.1-201ENST00000427102 353 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND4P03905 RPL36AP6-201ENST00000435770 321 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC241584.1-201ENST00000438469 1241 ntBASIC2.53□□□□□ -2
MT-ND4P03905 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.53□□□□□ -2
MT-ND4P03905 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.53□□□□□ -2
MT-ND4P03905 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.53□□□□□ -2
MT-ND4P03905 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.53□□□□□ -2
MT-ND4P03905 AC008571.1-201ENST00000467232 300 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC015908.1-201ENST00000478739 476 ntBASIC2.53□□□□□ -2
MT-ND4P03905 RPL21P131-201ENST00000497298 483 ntBASIC2.53□□□□□ -2
MT-ND4P03905 NAMPTP2-201ENST00000505629 1115 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC098799.2-201ENST00000509466 868 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.53□□□□□ -2
MT-ND4P03905 AC023632.1-201ENST00000518463 375 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.53□□□□□ -2
MT-ND4P03905 OR4P1P-201ENST00000530808 1136 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND4P03905 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND4P03905 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND4P03905 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.53□□□□□ -2
MT-ND4P03905 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.53□□□□□ -2
MT-ND4P03905 AC044913.1-201ENST00000557200 430 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC034105.3-201ENST00000565294 442 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND4P03905 AP001542.2-201ENST00000593141 364 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC106791.2-201ENST00000604680 391 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND4P03905 MIR7112-201ENST00000616126 65 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AC095031.1-201ENST00000623685 672 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AL512506.2-201ENST00000624472 458 ntBASIC2.53□□□□□ -2
MT-ND4P03905 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.53□□□□□ -2
MT-ND4P03905 AP003122.5-201ENST00000527668 3766 ntBASIC2.53□□□□□ -2
MT-ND4P03905 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.53□□□□□ -2
MT-ND4P03905 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.53□□□□□ -2
MT-ND4P03905 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
MT-ND4P03905 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2.01
MT-ND4P03905 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.52□□□□□ -2.01
MT-ND4P03905 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MT-ND4P03905 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MT-ND4P03905 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
MT-ND4P03905 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MT-ND4P03905 SNORA63.3-201ENST00000362682 132 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 RNU1-35P-201ENST00000362782 153 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 SNORD56.5-201ENST00000364281 72 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 RNA5SP267-201ENST00000364893 126 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MT-ND4P03905 RNU6-657P-201ENST00000383904 107 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 AC016769.3-201ENST00000396562 315 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 AL024474.1-201ENST00000404655 591 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 RN7SKP220-201ENST00000410611 288 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 RNA5SP120-201ENST00000410900 112 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 RPL21P32-201ENST00000419877 477 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.52□□□□□ -2.01
MT-ND4P03905 AC012497.1-201ENST00000429392 575 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
MT-ND4P03905 AC091862.1-201ENST00000438016 1100 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.52□□□□□ -2.01
MT-ND4P03905 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.52□□□□□ -2.01
MT-ND4P03905 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.52□□□□□ -2.01
MT-ND4P03905 RN7SL601P-201ENST00000471221 293 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 RPL32P34-201ENST00000486380 400 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 AC093801.2-201ENST00000503966 1050 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
MT-ND4P03905 RNU6-27P-201ENST00000516146 107 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 SNORA26.10-201ENST00000516427 141 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 SNORA48.10-201ENST00000516965 160 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 snoZ278.1-201ENST00000517059 112 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.52□□□□□ -2.01
MT-ND4P03905 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.52□□□□□ -2.01
MT-ND4P03905 AC023825.1-201ENST00000566704 1030 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.52□□□□□ -2.01
MT-ND4P03905 AC122134.1-202ENST00000569111 1201 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 AC245036.5-201ENST00000596330 847 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 MTATP6P2-201ENST00000603319 678 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 AP003973.1-201ENST00000604639 691 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 AL133507.1-201ENST00000605269 557 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 RPL21P136-201ENST00000605378 396 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 AC120053.1-201ENST00000607706 736 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.52□□□□□ -2.01
MT-ND4P03905 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.52□□□□□ -2.01
MT-ND4P03905 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 AL360181.4-201ENST00000621752 134 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.52□□□□□ -2.01
MT-ND4P03905 AC026634.1-201ENST00000634369 198 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MT-ND4P03905 AL049780.3-201ENST00000624612 1583 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MT-ND4P03905 DBF4P1-201ENST00000412976 1892 ntBASIC2.52□□□□□ -2.01
MT-ND4P03905 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
MT-ND4P03905 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms