Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 XKRYP4-201ENST00000414395 483 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AL645937.1-202ENST00000421799 937 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AL139415.2-201ENST00000431968 163 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.54□□□□□ -1.84
COL2A1P02458 PTGES3P1-201ENST00000439531 483 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL2A1P02458 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.54□□□□□ -1.84
COL2A1P02458 XKRYP5-201ENST00000449659 483 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AL591623.2-201ENST00000449978 222 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AL513124.1-201ENST00000450410 614 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.54□□□□□ -1.84
COL2A1P02458 ST13P14-201ENST00000474095 734 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AC016687.1-201ENST00000482574 353 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 LINC00888-204ENST00000487386 421 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.54□□□□□ -1.84
COL2A1P02458 SUMO1P1-201ENST00000497904 306 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AC108078.3-201ENST00000502633 489 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC116353.3-201ENST00000511215 249 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 MTCO2P32-201ENST00000514865 403 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 RNA5SP217-201ENST00000515959 91 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC060788.1-201ENST00000521318 469 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL2A1P02458 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AC087883.1-201ENST00000551882 391 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC068135.2-201ENST00000569293 1028 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC090616.2-202ENST00000584248 222 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AP001269.3-201ENST00000588718 329 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AC025946.2-201ENST00000603398 234 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AC239868.4-201ENST00000608318 671 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AL158063.1-201ENST00000615349 536 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 LINC00901.1-201ENST00000617252 152 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AL133370.2-201ENST00000619934 439 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AC092159.4-201ENST00000624944 550 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 ZNF663P-202ENST00000641770 1131 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL2A1P02458 AC073544.1-201ENST00000600110 1595 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AL451142.2-201ENST00000429076 2090 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL2A1P02458 MIR423-201ENST00000362201 94 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 MIR365B-201ENST00000362317 111 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 SNORD56.4-201ENST00000363883 71 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 XGY1-201ENST00000381172 446 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 Y_RNA.516-201ENST00000384541 124 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AL590084.2-201ENST00000401481 382 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 GSTA12P-201ENST00000402398 508 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.54□□□□□ -1.84
COL2A1P02458 AP000936.3-201ENST00000438127 255 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 PPIAP17-201ENST00000438507 471 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.54□□□□□ -1.84
COL2A1P02458 RN7SL20P-201ENST00000488827 297 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 HIGD1AP13-201ENST00000509878 289 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AC022447.1-201ENST00000515358 464 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC107016.2-201ENST00000547968 190 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 HIGD1AP17-201ENST00000554576 276 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.54□□□□□ -1.84
COL2A1P02458 MTND1P15-201ENST00000579262 949 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.54□□□□□ -1.84
COL2A1P02458 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.54□□□□□ -1.84
COL2A1P02458 AL365503.1-201ENST00000605247 905 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 ATP1B3P1-201ENST00000605365 821 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.54□□□□□ -1.84
COL2A1P02458 RPS4XP5-202ENST00000449995 1334 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
COL2A1P02458 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
COL2A1P02458 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL2A1P02458 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COL2A1P02458 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COL2A1P02458 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL2A1P02458 OR13C3-201ENST00000374781 1108 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.53□□□□□ -1.84
COL2A1P02458 AC110754.1-201ENST00000399740 601 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.53□□□□□ -1.84
COL2A1P02458 CDK8P2-201ENST00000415020 547 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 NPM1P11-201ENST00000417106 855 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 AC006960.1-201ENST00000419980 153 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 MTCO2P34-201ENST00000421994 607 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.53□□□□□ -1.84
COL2A1P02458 SGO1P2-201ENST00000429458 1589 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.53□□□□□ -1.84
COL2A1P02458 MTND1P32-201ENST00000433043 938 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 AL606490.7-201ENST00000433136 191 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 RPS27P5-201ENST00000444247 244 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.53□□□□□ -1.84
COL2A1P02458 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.53□□□□□ -1.84
COL2A1P02458 AL109933.2-201ENST00000452651 260 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 AC023050.1-201ENST00000498198 304 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms