Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-2O95096 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX2-2O95096 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX2-2O95096 AC112191.3-201ENST00000604371 277 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AL022099.1-201ENST00000604551 712 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX2-2O95096 AC245008.1-201ENST00000608123 476 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AC239868.4-201ENST00000608318 671 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AL590240.3-201ENST00000621416 943 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-2O95096 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX2-2O95096 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
NKX2-2O95096 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-2O95096 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
NKX2-2O95096 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-2O95096 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-2O95096 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX2-2O95096 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX2-2O95096 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
NKX2-2O95096 SPRR2C-201ENST00000290702 219 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 Y_RNA.201-201ENST00000364052 96 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AC233728.2-201ENST00000425348 757 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AL353777.1-201ENST00000425552 326 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AL356583.2-201ENST00000426536 280 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 RPL21P66-201ENST00000426566 466 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 VDAC1P3-201ENST00000434069 851 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AC004866.2-201ENST00000438285 481 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AL049734.2-201ENST00000441066 616 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 ST13P20-201ENST00000447996 1065 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AL500522.2-201ENST00000448562 343 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AL162151.2-201ENST00000448875 158 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.61□□□□□ -1.83
NKX2-2O95096 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AC068724.1-201ENST00000487100 792 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AC004069.2-201ENST00000505438 1114 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 FTH1P21-201ENST00000512179 511 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX2-2O95096 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AC022878.1-201ENST00000530684 149 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 PARP1P2-201ENST00000556806 195 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 FAM60BP-201ENST00000578364 658 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX2-2O95096 MIR3690-201ENST00000580266 75 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AC007687.1-201ENST00000602704 304 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AL592436.1-201ENST00000605135 558 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AC064807.4-201ENST00000607201 407 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 OR10AB1P-201ENST00000609613 938 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AL355472.4-201ENST00000610233 626 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 AC004825.2-201ENST00000616634 455 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 MIR6500-201ENST00000622700 86 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-2O95096 RNA5SP196-201ENST00000625967 102 ntBASIC3.61□□□□□ -1.83
NKX2-2O95096 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NKX2-2O95096 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NKX2-2O95096 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NKX2-2O95096 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NKX2-2O95096 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX2-2O95096 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NKX2-2O95096 MIR372-201ENST00000362225 67 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 Y_RNA.51-201ENST00000362725 102 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 RNU6-637P-201ENST00000384050 107 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AL136372.1-201ENST00000403060 228 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 RPS3AP24-201ENST00000407896 734 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-2O95096 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-2O95096 AL117339.2-201ENST00000430475 180 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC092641.1-201ENST00000440229 772 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-2O95096 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.6□□□□□ -1.83
NKX2-2O95096 RPL21P89-201ENST00000444021 467 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 RAC1P7-201ENST00000445367 377 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-2O95096 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-2O95096 MTCO2P18-201ENST00000457151 658 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 RN7SL385P-201ENST00000468873 276 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 PPIAP15-201ENST00000479662 484 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 AC055855.1-201ENST00000489563 579 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.6□□□□□ -1.83
NKX2-2O95096 AC010424.1-201ENST00000506336 297 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 MLLT10P2-201ENST00000506434 249 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC004062.1-201ENST00000509926 645 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms