Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 Y_RNA.535-201ENST00000384612 99 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 MIR1179-201ENST00000408703 91 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 RAB28P1-201ENST00000411517 641 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 AC078974.1-201ENST00000411597 223 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 NUP35P2-201ENST00000416748 943 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 RPL23AP38-201ENST00000423801 469 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 RPL36P19-201ENST00000430744 301 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 HLA-N-201ENST00000437516 135 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 TPT1P12-201ENST00000448968 492 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.36□□□□□ -1.55
VAMP4O75379 AC022364.2-201ENST00000457963 554 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 RN7SL385P-201ENST00000468873 276 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.36□□□□□ -1.55
VAMP4O75379 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.36□□□□□ -1.55
VAMP4O75379 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.36□□□□□ -1.55
VAMP4O75379 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 AC063950.1-201ENST00000552036 308 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 AC009101.1-201ENST00000568135 242 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.36□□□□□ -1.55
VAMP4O75379 BNIP3P10-201ENST00000605360 577 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAMP4O75379 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VAMP4O75379 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAMP4O75379 MIR492-201ENST00000638676 116 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.36□□□□□ -1.55
VAMP4O75379 AL049555.1-201ENST00000562834 1933 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAMP4O75379 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
VAMP4O75379 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
VAMP4O75379 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAMP4O75379 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
VAMP4O75379 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.36□□□□□ -1.55
VAMP4O75379 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VAMP4O75379 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAMP4O75379 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.35□□□□□ -1.55
VAMP4O75379 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VAMP4O75379 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VAMP4O75379 AC091046.3-201ENST00000631455 1574 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.35□□□□□ -1.55
VAMP4O75379 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.35□□□□□ -1.55
VAMP4O75379 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VAMP4O75379 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VAMP4O75379 AL161781.1-201ENST00000354277 403 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VAMP4O75379 RNU1-94P-201ENST00000362627 173 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 Y_RNA.509-201ENST00000384506 99 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 snosnR66.1-201ENST00000391095 99 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 AL024474.1-201ENST00000404655 591 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 BTBD10P2-201ENST00000404779 676 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.35□□□□□ -1.55
VAMP4O75379 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.35□□□□□ -1.55
VAMP4O75379 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.35□□□□□ -1.55
VAMP4O75379 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.35□□□□□ -1.55
VAMP4O75379 RPL23AP89-201ENST00000439324 255 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 SDCBPP1-201ENST00000440192 890 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 AC006011.1-201ENST00000442758 349 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 AC093019.1-201ENST00000443135 252 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 AP1S2P1-201ENST00000457344 379 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 RNU6-420P-201ENST00000458780 107 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 RPL7P19-201ENST00000469948 618 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 RPS26P28-201ENST00000470806 348 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.35□□□□□ -1.55
VAMP4O75379 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.35□□□□□ -1.55
VAMP4O75379 AC093677.1-201ENST00000514414 678 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 SNORA31.9-201ENST00000516429 84 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.35□□□□□ -1.55
VAMP4O75379 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.35□□□□□ -1.55
VAMP4O75379 AP003072.2-201ENST00000527756 676 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.35□□□□□ -1.55
VAMP4O75379 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.35□□□□□ -1.55
VAMP4O75379 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.35□□□□□ -1.55
VAMP4O75379 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.35□□□□□ -1.55
VAMP4O75379 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.35□□□□□ -1.55
VAMP4O75379 SUB1P2-201ENST00000556401 297 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 AC044792.1-201ENST00000593294 196 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 RPL23AP92-201ENST00000603609 255 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 AC123768.4-201ENST00000616244 701 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 AC010338.1-201ENST00000621823 717 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 AC093648.1-201ENST00000623546 606 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 CYP3A51P-201ENST00000633513 256 ntBASIC5.35□□□□□ -1.55
VAMP4O75379 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.35□□□□□ -1.55
VAMP4O75379 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
VAMP4O75379 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAMP4O75379 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAMP4O75379 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VAMP4O75379 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAMP4O75379 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
VAMP4O75379 OR5J1P-201ENST00000313544 939 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 RNY3P3-201ENST00000363816 102 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 RPS4XP8-201ENST00000402039 771 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 RNA5SP146-201ENST00000410743 123 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.34□□□□□ -1.55
VAMP4O75379 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.34□□□□□ -1.55
VAMP4O75379 RPL7P54-201ENST00000438336 674 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 AC239809.1-201ENST00000450470 217 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.34□□□□□ -1.55
VAMP4O75379 MTCO2P30-201ENST00000503662 364 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.34□□□□□ -1.55
VAMP4O75379 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.34□□□□□ -1.55
VAMP4O75379 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms