Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL359837.1-201ENST00000381357 287 ntBASIC3.48□□□□□ -1.85
PRKNO60260 RNU6-809P-201ENST00000384461 107 ntBASIC3.48□□□□□ -1.85
PRKNO60260 SNORA48.7-201ENST00000391302 135 ntBASIC3.48□□□□□ -1.85
PRKNO60260 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.48□□□□□ -1.85
PRKNO60260 RN7SKP266-201ENST00000410232 287 ntBASIC3.48□□□□□ -1.85
PRKNO60260 RNU2-16P-201ENST00000410712 136 ntBASIC3.48□□□□□ -1.85
PRKNO60260 RPS12P23-201ENST00000419579 400 ntBASIC3.48□□□□□ -1.85
PRKNO60260 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.48□□□□□ -1.85
PRKNO60260 OFD1P18Y-201ENST00000420889 959 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AL445669.1-201ENST00000426743 755 ntBASIC3.48□□□□□ -1.85
PRKNO60260 PSMA6P3-201ENST00000428242 164 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.48□□□□□ -1.85
PRKNO60260 AC127537.2-201ENST00000439258 465 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.48□□□□□ -1.85
PRKNO60260 AL133547.1-201ENST00000448546 220 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.48□□□□□ -1.85
PRKNO60260 AC091153.1-201ENST00000466297 402 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC022034.3-201ENST00000471393 478 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AP000926.1-201ENST00000479573 241 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC069499.1-201ENST00000489433 509 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.48□□□□□ -1.85
PRKNO60260 UBE2CP3-201ENST00000502715 450 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC025445.1-201ENST00000502728 300 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC022447.3-201ENST00000506865 495 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.48□□□□□ -1.85
PRKNO60260 AC005798.1-201ENST00000513715 387 ntBASIC3.48□□□□□ -1.85
PRKNO60260 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.48□□□□□ -1.85
PRKNO60260 FABP5P5-201ENST00000515537 406 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.48□□□□□ -1.85
PRKNO60260 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.48□□□□□ -1.85
PRKNO60260 MTND4LP18-201ENST00000526864 291 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AP002453.2-201ENST00000533503 320 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.48□□□□□ -1.85
PRKNO60260 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.48□□□□□ -1.85
PRKNO60260 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.48□□□□□ -1.85
PRKNO60260 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.48□□□□□ -1.85
PRKNO60260 MIR4307-201ENST00000582802 84 ntBASIC3.48□□□□□ -1.85
PRKNO60260 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.48□□□□□ -1.85
PRKNO60260 AC015871.2-201ENST00000603605 948 ntBASIC3.48□□□□□ -1.85
PRKNO60260 RPL23AP92-201ENST00000603609 255 ntBASIC3.48□□□□□ -1.85
PRKNO60260 SEPT7P9-203ENST00000604116 343 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AL137849.1-201ENST00000604767 169 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AL009028.1-201ENST00000604895 802 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AL049634.3-201ENST00000604968 457 ntBASIC3.48□□□□□ -1.85
PRKNO60260 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRKNO60260 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC092354.2-201ENST00000607786 514 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AL357080.1-201ENST00000617394 239 ntBASIC3.48□□□□□ -1.85
PRKNO60260 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.48□□□□□ -1.85
PRKNO60260 AL445264.1-201ENST00000621719 171 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC004009.2-201ENST00000623016 728 ntBASIC3.48□□□□□ -1.85
PRKNO60260 AC034229.5-201ENST00000624258 185 ntBASIC3.48□□□□□ -1.85
PRKNO60260 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.48□□□□□ -1.85
PRKNO60260 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRKNO60260 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.48□□□□□ -1.85
PRKNO60260 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
PRKNO60260 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
PRKNO60260 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRKNO60260 TEX21P-201ENST00000447107 1476 ntBASIC3.47□□□□□ -1.85
PRKNO60260 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PRKNO60260 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRKNO60260 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PRKNO60260 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRKNO60260 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRKNO60260 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.47□□□□□ -1.85
PRKNO60260 SNORA62.3-201ENST00000365110 153 ntBASIC3.47□□□□□ -1.85
PRKNO60260 RNU6-769P-201ENST00000384407 104 ntBASIC3.47□□□□□ -1.85
PRKNO60260 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PRKNO60260 MIR1305-201ENST00000408300 86 ntBASIC3.47□□□□□ -1.85
PRKNO60260 RN7SKP177-201ENST00000410567 355 ntBASIC3.47□□□□□ -1.85
PRKNO60260 RPL31P2-201ENST00000413849 377 ntBASIC3.47□□□□□ -1.85
PRKNO60260 MTATP6P27-201ENST00000416987 621 ntBASIC3.47□□□□□ -1.85
PRKNO60260 RPL31P45-201ENST00000419532 356 ntBASIC3.47□□□□□ -1.85
PRKNO60260 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRKNO60260 AL356583.2-201ENST00000426536 280 ntBASIC3.47□□□□□ -1.85
PRKNO60260 PSMA2P3-201ENST00000429685 675 ntBASIC3.47□□□□□ -1.85
PRKNO60260 RSU1P2-202ENST00000437884 485 ntBASIC3.47□□□□□ -1.85
PRKNO60260 MUPP-201ENST00000438111 566 ntBASIC3.47□□□□□ -1.85
PRKNO60260 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.47□□□□□ -1.85
PRKNO60260 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.47□□□□□ -1.85
PRKNO60260 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.47□□□□□ -1.85
PRKNO60260 TPT1P7-201ENST00000458300 517 ntBASIC3.47□□□□□ -1.85
PRKNO60260 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.47□□□□□ -1.85
PRKNO60260 AC106872.2-201ENST00000494303 480 ntBASIC3.47□□□□□ -1.85
PRKNO60260 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.47□□□□□ -1.85
PRKNO60260 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRKNO60260 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.47□□□□□ -1.85
PRKNO60260 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.47□□□□□ -1.85
PRKNO60260 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.47□□□□□ -1.85
PRKNO60260 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.47□□□□□ -1.85
PRKNO60260 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.47□□□□□ -1.85
PRKNO60260 AC053481.3-201ENST00000577881 843 ntBASIC3.47□□□□□ -1.85
PRKNO60260 MIR5697-201ENST00000578045 78 ntBASIC3.47□□□□□ -1.85
PRKNO60260 MIR4429-201ENST00000580105 73 ntBASIC3.47□□□□□ -1.85
PRKNO60260 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.47□□□□□ -1.85
PRKNO60260 MIR5187-201ENST00000583479 76 ntBASIC3.47□□□□□ -1.85
PRKNO60260 AC068790.5-201ENST00000602741 355 ntBASIC3.47□□□□□ -1.85
PRKNO60260 BCRP9-201ENST00000605312 388 ntBASIC3.47□□□□□ -1.85
PRKNO60260 AL390208.1-201ENST00000605885 644 ntBASIC3.47□□□□□ -1.85
PRKNO60260 AC138932.5-201ENST00000617759 563 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms