Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.45□□□□□ -1.7
NPHP1O15259 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.45□□□□□ -1.7
NPHP1O15259 AC093677.1-201ENST00000514414 678 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 RNA5SP468-201ENST00000516782 93 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 SNRPGP16-201ENST00000533275 226 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 AC023050.2-201ENST00000544968 387 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.45□□□□□ -1.7
NPHP1O15259 MTND1P24-201ENST00000552175 861 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 DUXAP1-201ENST00000556632 463 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.45□□□□□ -1.7
NPHP1O15259 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.45□□□□□ -1.7
NPHP1O15259 AC112220.3-201ENST00000605502 502 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 AC103710.3-201ENST00000608157 948 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 AL355810.1-201ENST00000614629 552 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 AP002782.1-201ENST00000623107 614 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 AL732618.1-201ENST00000623251 301 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NPHP1O15259 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPHP1O15259 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPHP1O15259 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPHP1O15259 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.45□□□□□ -1.7
NPHP1O15259 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.44□□□□□ -1.7
NPHP1O15259 OTUD4P1-201ENST00000237841 3067 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 U3.26-201ENST00000391236 204 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NPHP1O15259 MTCO2P17-201ENST00000424336 677 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 ZYG11AP1-201ENST00000430329 837 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 AL590103.1-201ENST00000434488 307 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 AC091862.1-201ENST00000438016 1100 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 AC006028.1-201ENST00000438379 402 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 MTCYBP31-201ENST00000438855 1122 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.44□□□□□ -1.7
NPHP1O15259 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.44□□□□□ -1.7
NPHP1O15259 MLLT10P2-201ENST00000506434 249 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.44□□□□□ -1.7
NPHP1O15259 AC119751.5-201ENST00000514077 770 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 RN7SKP265-201ENST00000516448 223 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 RNU5A-4P-201ENST00000516588 111 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 COX6CP8-201ENST00000522620 226 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.44□□□□□ -1.7
NPHP1O15259 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.44□□□□□ -1.7
NPHP1O15259 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.44□□□□□ -1.7
NPHP1O15259 FAM60BP-201ENST00000578364 658 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.44□□□□□ -1.7
NPHP1O15259 AC012493.2-201ENST00000595083 291 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 VN1R82P-201ENST00000601481 356 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.44□□□□□ -1.7
NPHP1O15259 DUXAP11-201ENST00000603858 526 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 AL031176.1-201ENST00000604554 466 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 AL133507.1-201ENST00000605269 557 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.44□□□□□ -1.7
NPHP1O15259 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.44□□□□□ -1.7
NPHP1O15259 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.44□□□□□ -1.7
NPHP1O15259 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.44□□□□□ -1.7
NPHP1O15259 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.44□□□□□ -1.7
NPHP1O15259 BDP1P-201ENST00000582658 1990 ntBASIC4.44□□□□□ -1.7
NPHP1O15259 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPHP1O15259 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
NPHP1O15259 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NPHP1O15259 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPHP1O15259 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NPHP1O15259 RNU4-28P-201ENST00000364739 141 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NPHP1O15259 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.43□□□□□ -1.7
NPHP1O15259 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 RPL22P18-201ENST00000417197 377 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 MTCO1P39-201ENST00000426148 480 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.43□□□□□ -1.7
NPHP1O15259 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.43□□□□□ -1.7
NPHP1O15259 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.43□□□□□ -1.7
NPHP1O15259 MTND5P14-201ENST00000441481 1267 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.43□□□□□ -1.7
NPHP1O15259 MEMO1P3-201ENST00000459811 302 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 AP001486.1-201ENST00000463339 476 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 AL049873.1-201ENST00000480540 376 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.43□□□□□ -1.7
NPHP1O15259 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.43□□□□□ -1.7
NPHP1O15259 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NPHP1O15259 AC090136.1-201ENST00000520009 240 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NPHP1O15259 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
NPHP1O15259 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NPHP1O15259 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.43□□□□□ -1.7
NPHP1O15259 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.43□□□□□ -1.7
NPHP1O15259 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.43□□□□□ -1.7
NPHP1O15259 AC090615.1-201ENST00000577519 154 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.43□□□□□ -1.7
NPHP1O15259 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 AC091905.1-201ENST00000624400 311 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.43□□□□□ -1.7
NPHP1O15259 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPHP1O15259 NCAPGP1-201ENST00000505112 1814 ntBASIC4.43□□□□□ -1.7
NPHP1O15259 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPHP1O15259 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.43□□□□□ -1.7
NPHP1O15259 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.43□□□□□ -1.7
NPHP1O15259 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPHP1O15259 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.42□□□□□ -1.7
NPHP1O15259 AL353743.1-202ENST00000431724 1695 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms