Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM38O00635 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM38O00635 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM38O00635 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TRIM38O00635 RN7SKP280-201ENST00000364196 304 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM38O00635 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM38O00635 RNU4-78P-201ENST00000410940 126 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 AC244098.2-201ENST00000422068 99 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM38O00635 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM38O00635 ISCA1P1-201ENST00000426679 387 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 AL365184.2-201ENST00000431139 435 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 USP12PX-201ENST00000432383 1057 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM38O00635 MTCYBP45-201ENST00000435243 565 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM38O00635 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM38O00635 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM38O00635 ST13P20-201ENST00000447996 1065 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 RPL36AP33-201ENST00000450395 310 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 AL353691.1-201ENST00000451332 387 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM38O00635 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM38O00635 AL121769.1-201ENST00000469473 401 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM38O00635 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM38O00635 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM38O00635 OR4P1P-201ENST00000530808 1136 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM38O00635 AC013828.2-201ENST00000532487 235 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.32□□□□□ -1.72
TRIM38O00635 AC034105.4-201ENST00000568304 277 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 MIR544B-201ENST00000582372 78 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 HMGN2P28-201ENST00000606102 262 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 AC010133.1-201ENST00000615809 842 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 MIR6891-201ENST00000618788 93 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 AL157786.1-207ENST00000627771 695 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TRIM38O00635 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM38O00635 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM38O00635 AL158163.1-201ENST00000603915 1649 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TRIM38O00635 ELF2P3-201ENST00000445099 1506 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM38O00635 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
TRIM38O00635 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRIM38O00635 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM38O00635 LARP1BP1-201ENST00000506036 1359 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM38O00635 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM38O00635 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
TRIM38O00635 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM38O00635 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRIM38O00635 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRIM38O00635 RNU6-335P-201ENST00000364563 113 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 RNU6-769P-201ENST00000384407 104 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 AL583834.1-201ENST00000406943 343 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 SNORA11F-201ENST00000408237 128 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 RPS23P10-201ENST00000416185 486 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 EI24P1-201ENST00000416584 867 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 CYCSP46-201ENST00000423569 204 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 USP9YP18-201ENST00000425912 695 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM38O00635 NANOGP6-201ENST00000429190 847 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM38O00635 RPL23AP52-201ENST00000439311 478 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 HMGN2P21-201ENST00000447764 270 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 NANOGNBP1-201ENST00000448444 480 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 SNRPGP9-201ENST00000456025 225 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM38O00635 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM38O00635 S100A11P1-201ENST00000477525 312 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 MTND5P5-201ENST00000503764 376 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM38O00635 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM38O00635 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM38O00635 SCARNA15.1-201ENST00000516384 125 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 RNU6-714P-201ENST00000516963 103 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM38O00635 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.31□□□□□ -1.72
TRIM38O00635 AC009063.1-201ENST00000563342 702 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM38O00635 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM38O00635 BPIFA4P-203ENST00000603168 689 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 DUXAP9-208ENST00000622815 614 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM38O00635 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM38O00635 AC092326.2-201ENST00000624772 1561 ntBASIC4.31□□□□□ -1.72
TRIM38O00635 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM38O00635 AL157700.1-201ENST00000561973 1432 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM38O00635 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM38O00635 SPRR2C-201ENST00000290702 219 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM38O00635 RNA5SP307-201ENST00000362863 116 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 RNU6-181P-201ENST00000363225 107 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 RNU6-1249P-201ENST00000363237 111 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 Y_RNA.256-201ENST00000364594 104 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms