Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.06□□□□□ -2.08
SDCBPO00560 HMGB1P6-201ENST00000569046 646 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 RPL23AP84-201ENST00000571193 464 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 MIR4319-201ENST00000577285 85 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 AC061975.8-201ENST00000587058 721 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 VN1R92P-201ENST00000598511 928 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 AL049779.4-201ENST00000604500 156 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 AC018618.2-201ENST00000604770 446 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SDCBPO00560 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.06□□□□□ -2.08
SDCBPO00560 AC095031.1-201ENST00000623685 672 ntBASIC2.06□□□□□ -2.08
SDCBPO00560 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SDCBPO00560 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SDCBPO00560 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.05□□□□□ -2.08
SDCBPO00560 RPL21P132-201ENST00000331267 462 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 RNU6-989P-201ENST00000362756 107 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SDCBPO00560 FO393413.1-201ENST00000402892 195 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 AL158825.1-201ENST00000414735 521 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.05□□□□□ -2.08
SDCBPO00560 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.05□□□□□ -2.08
SDCBPO00560 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.05□□□□□ -2.08
SDCBPO00560 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.05□□□□□ -2.08
SDCBPO00560 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.05□□□□□ -2.08
SDCBPO00560 AC096576.1-201ENST00000489014 359 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.05□□□□□ -2.08
SDCBPO00560 RNU6-202P-201ENST00000515998 96 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 RNU6-760P-201ENST00000516078 97 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.05□□□□□ -2.08
SDCBPO00560 ERHP1-201ENST00000523006 310 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.05□□□□□ -2.08
SDCBPO00560 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SDCBPO00560 DNAJC8P1-201ENST00000554535 372 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 EIF4BP1-201ENST00000554881 351 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.05□□□□□ -2.08
SDCBPO00560 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.05□□□□□ -2.08
SDCBPO00560 AL669831.4-202ENST00000590817 238 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 RPL23AP78-201ENST00000599928 470 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 AC009220.3-201ENST00000604318 586 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 HSPE1P14-201ENST00000605812 302 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 AC018926.3-201ENST00000618841 406 ntBASIC2.05□□□□□ -2.08
SDCBPO00560 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.05□□□□□ -2.08
SDCBPO00560 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.05□□□□□ -2.08
SDCBPO00560 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.05□□□□□ -2.08
SDCBPO00560 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SDCBPO00560 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SDCBPO00560 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SDCBPO00560 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SDCBPO00560 NACA3P-201ENST00000359690 648 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 RNA5SP258-201ENST00000362750 119 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 RNA5SP393-201ENST00000363423 117 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 SNORA5B-201ENST00000363786 132 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 SNORA80A-201ENST00000363922 136 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SDCBPO00560 RNU1-138P-201ENST00000384093 164 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 RNU6-1226P-201ENST00000384317 107 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 SNORA41-201ENST00000384675 132 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 MIR27B-201ENST00000385129 97 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 RNA5SP184-201ENST00000411071 108 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SDCBPO00560 AL606495.1-201ENST00000422100 813 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 UBE2V1P5-201ENST00000440070 405 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.04□□□□□ -2.08
SDCBPO00560 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.04□□□□□ -2.08
SDCBPO00560 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.04□□□□□ -2.08
SDCBPO00560 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.04□□□□□ -2.08
SDCBPO00560 AP000852.1-201ENST00000472460 573 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 AC015724.1-201ENST00000478577 156 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.04□□□□□ -2.08
SDCBPO00560 DSTNP2-201ENST00000504533 515 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.04□□□□□ -2.08
SDCBPO00560 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.04□□□□□ -2.08
SDCBPO00560 RN7SKP24-201ENST00000515888 284 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 RNA5SP356-201ENST00000515972 94 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 SNORA31.11-201ENST00000516528 139 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.04□□□□□ -2.08
SDCBPO00560 AP003467.2-201ENST00000520175 319 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.04□□□□□ -2.08
SDCBPO00560 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
SDCBPO00560 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.04□□□□□ -2.08
SDCBPO00560 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.04□□□□□ -2.08
SDCBPO00560 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.04□□□□□ -2.08
SDCBPO00560 AL033523.1-201ENST00000605153 153 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 AL512283.1-201ENST00000606756 1384 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
SDCBPO00560 U4.3-201ENST00000621047 82 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 AP003122.6-201ENST00000623831 495 ntBASIC2.04□□□□□ -2.08
SDCBPO00560 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.04□□□□□ -2.08
SDCBPO00560 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SDCBPO00560 AC069528.2-201ENST00000624849 1991 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SDCBPO00560 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SDCBPO00560 AC005336.3-201ENST00000623833 2679 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SDCBPO00560 AC062016.1-201ENST00000355719 319 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 ANAPC10P1-201ENST00000395991 556 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.03□□□□□ -2.08
SDCBPO00560 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.03□□□□□ -2.08
SDCBPO00560 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.03□□□□□ -2.08
SDCBPO00560 AC114973.1-201ENST00000429057 632 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms