Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 RPL21P41-201ENST00000459863 264 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 RNA5SP200-201ENST00000516360 103 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 SNORA64.4-201ENST00000516632 81 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 OR4A45P-201ENST00000529954 901 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 AMZ2P1-203ENST00000565833 850 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 uc_338.5-201ENST00000611839 155 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 MIR6766-201ENST00000622641 72 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 AC093775.1-201ENST00000624154 1868 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.06□□□□□ -2.08
CACNA1AO00555 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.06□□□□□ -2.08
CACNA1AO00555 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CACNA1AO00555 RNU6-716P-201ENST00000365621 103 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 AL162578.1-201ENST00000406202 378 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.06□□□□□ -2.08
CACNA1AO00555 RPL23AP71-201ENST00000470966 469 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 ICE2P2-201ENST00000483823 2787 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 OR52A4P-203ENST00000498233 1014 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 BOLA3P3-201ENST00000505182 232 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CACNA1AO00555 AL359273.1-201ENST00000510918 627 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.06□□□□□ -2.08
CACNA1AO00555 AF131216.2-201ENST00000512316 564 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.06□□□□□ -2.08
CACNA1AO00555 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CACNA1AO00555 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CACNA1AO00555 MIR221-201ENST00000385135 110 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.06□□□□□ -2.08
CACNA1AO00555 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.06□□□□□ -2.08
CACNA1AO00555 AP000942.1-201ENST00000463969 747 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.06□□□□□ -2.08
CACNA1AO00555 FABP5P5-201ENST00000515537 406 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 OR1AB1P-201ENST00000585564 761 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 AL451074.6-201ENST00000608512 729 ntBASIC2.06□□□□□ -2.08
CACNA1AO00555 OR11H5P-202ENST00000641612 1325 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 RPS15AP28-201ENST00000435088 386 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 AL590762.3-201ENST00000436372 640 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 Z99714.1-201ENST00000450463 807 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 AC009474.2-201ENST00000451383 136 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 RPS6P4-201ENST00000494693 758 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 AC021146.5-201ENST00000503544 545 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.05□□□□□ -2.08
CACNA1AO00555 MTCYBP20-201ENST00000524239 1129 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 HMGN2P47-201ENST00000559378 272 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.05□□□□□ -2.08
CACNA1AO00555 AC138627.1-204ENST00000641894 765 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CACNA1AO00555 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CACNA1AO00555 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CACNA1AO00555 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.05□□□□□ -2.08
CACNA1AO00555 OR2X1P-201ENST00000421144 687 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.05□□□□□ -2.08
CACNA1AO00555 RPS23P4-201ENST00000487908 423 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.05□□□□□ -2.08
CACNA1AO00555 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CACNA1AO00555 RNA5SP182-201ENST00000516064 82 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 WDR61-205ENST00000558459 884 ntTSL 3 BASIC2.05□□□□□ -2.08
CACNA1AO00555 AC012640.5-201ENST00000623897 319 ntBASIC2.05□□□□□ -2.08
CACNA1AO00555 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CACNA1AO00555 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CACNA1AO00555 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CACNA1AO00555 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
CACNA1AO00555 ZNF603P-201ENST00000405613 487 ntBASIC2.04□□□□□ -2.08
CACNA1AO00555 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.04□□□□□ -2.08
CACNA1AO00555 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.04□□□□□ -2.08
CACNA1AO00555 AL034379.1-201ENST00000423216 253 ntBASIC2.04□□□□□ -2.08
CACNA1AO00555 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.04□□□□□ -2.08
CACNA1AO00555 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CACNA1AO00555 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.04□□□□□ -2.08
CACNA1AO00555 AC090543.2-201ENST00000483963 348 ntBASIC2.04□□□□□ -2.08
CACNA1AO00555 SETP7-201ENST00000552169 453 ntBASIC2.04□□□□□ -2.08
CACNA1AO00555 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.04□□□□□ -2.08
CACNA1AO00555 AC091953.2-201ENST00000623979 160 ntBASIC2.04□□□□□ -2.08
CACNA1AO00555 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.04□□□□□ -2.08
CACNA1AO00555 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CACNA1AO00555 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CACNA1AO00555 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CACNA1AO00555 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.04□□□□□ -2.08
CACNA1AO00555 MTND4P12-201ENST00000498999 1377 ntBASIC2.04□□□□□ -2.08
CACNA1AO00555 RNU6-316P-201ENST00000391027 107 ntBASIC2.03□□□□□ -2.08
CACNA1AO00555 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.03□□□□□ -2.08
CACNA1AO00555 AC234781.2-201ENST00000426370 994 ntBASIC2.03□□□□□ -2.08
CACNA1AO00555 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC2.03□□□□□ -2.08
CACNA1AO00555 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CACNA1AO00555 SNX5P1-201ENST00000505757 1041 ntBASIC2.03□□□□□ -2.08
CACNA1AO00555 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.03□□□□□ -2.08
CACNA1AO00555 XKRY-201ENST00000510392 1100 ntBASIC2.03□□□□□ -2.08
CACNA1AO00555 RN7SKP49-201ENST00000516675 260 ntBASIC2.03□□□□□ -2.08
CACNA1AO00555 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.03□□□□□ -2.08
CACNA1AO00555 AL109933.3-201ENST00000619095 188 ntBASIC2.03□□□□□ -2.08
CACNA1AO00555 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.03□□□□□ -2.08
CACNA1AO00555 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CACNA1AO00555 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.03□□□□□ -2.08
CACNA1AO00555 AIMP1P1-201ENST00000418670 937 ntBASIC2.03□□□□□ -2.08
CACNA1AO00555 AC092427.1-202ENST00000430569 476 ntBASIC2.03□□□□□ -2.08
CACNA1AO00555 AC079203.1-201ENST00000487972 404 ntBASIC2.03□□□□□ -2.08
CACNA1AO00555 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.03□□□□□ -2.08
CACNA1AO00555 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.03□□□□□ -2.08
CACNA1AO00555 NARSP2-201ENST00000518524 679 ntBASIC2.03□□□□□ -2.08
CACNA1AO00555 AC245166.1-201ENST00000521012 253 ntBASIC2.03□□□□□ -2.08
CACNA1AO00555 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms