Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 Z98742.2-201ENST00000431564 187 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 CKS1BP5-201ENST00000434172 273 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 ELOCP11-201ENST00000436690 332 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 RPL23AP33-201ENST00000442301 452 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 ELOCP16-201ENST00000444494 332 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.82□□□□□ -2.12
HMGN4O00479 HMGB1P38-201ENST00000490557 577 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.82□□□□□ -2.12
HMGN4O00479 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.82□□□□□ -2.12
HMGN4O00479 AC008549.1-201ENST00000512900 643 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 AC017037.2-201ENST00000513850 890 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 RNU1-61P-201ENST00000516107 151 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGN4O00479 AC025755.1-201ENST00000521306 278 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 FAM92A1P1-201ENST00000528023 890 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 AC025423.2-201ENST00000537570 439 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.82□□□□□ -2.12
HMGN4O00479 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGN4O00479 AC084373.1-201ENST00000603311 235 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 AC064859.1-201ENST00000624741 174 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 AC090897.3-201ENST00000636973 1157 ntBASIC1.82□□□□□ -2.12
HMGN4O00479 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMGN4O00479 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
HMGN4O00479 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMGN4O00479 AL138880.1-201ENST00000405824 642 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 SNORA81-201ENST00000408493 178 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 MTCYBP7-201ENST00000419540 1134 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 AL139415.2-201ENST00000431968 163 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.81□□□□□ -2.12
HMGN4O00479 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.81□□□□□ -2.12
HMGN4O00479 RPS15AP7-201ENST00000439294 405 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.81□□□□□ -2.12
HMGN4O00479 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGN4O00479 AC009237.8-201ENST00000445492 379 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 AL353705.4-201ENST00000449661 238 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 MTCO3P35-201ENST00000485582 781 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGN4O00479 AC106872.3-201ENST00000495104 446 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 MTCYBP37-201ENST00000510642 1133 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 RNA5SP82-201ENST00000516707 92 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.81□□□□□ -2.12
HMGN4O00479 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.81□□□□□ -2.12
HMGN4O00479 COX6CP5-201ENST00000527162 228 ntBASIC1.81□□□□□ -2.12
HMGN4O00479 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGN4O00479 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGN4O00479 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
HMGN4O00479 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMGN4O00479 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMGN4O00479 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGN4O00479 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
HMGN4O00479 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HMGN4O00479 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
HMGN4O00479 ZNF658B-202ENST00000615961 3375 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 SNORD56.5-201ENST00000364281 72 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 RNU6-335P-201ENST00000364563 113 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 CD24P4-201ENST00000382840 243 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.8□□□□□ -2.12
HMGN4O00479 AL590290.1-201ENST00000405336 380 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGN4O00479 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGN4O00479 DPH3P2-201ENST00000422618 250 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 RPL21P66-201ENST00000426566 466 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 FAM103A2P-201ENST00000444122 354 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HMGN4O00479 OR4G11P-201ENST00000492842 939 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 AC023424.2-201ENST00000493479 777 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
HMGN4O00479 SEM1P1-201ENST00000506694 209 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 AC119751.5-201ENST00000514077 770 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGN4O00479 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGN4O00479 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.8□□□□□ -2.12
HMGN4O00479 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGN4O00479 MYL12BP1-201ENST00000569826 507 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGN4O00479 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGN4O00479 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGN4O00479 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGN4O00479 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
HMGN4O00479 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMGN4O00479 MAPK10-266ENST00000641066 6555 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 ELF2P3-201ENST00000445099 1506 ntBASIC1.8□□□□□ -2.12
HMGN4O00479 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMGN4O00479 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.79□□□□□ -2.12
HMGN4O00479 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMGN4O00479 SNORA14A-201ENST00000364773 135 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HMGN4O00479 RNU4-52P-201ENST00000384209 138 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 FO393413.1-201ENST00000402892 195 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 AL591034.1-201ENST00000407447 340 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 AC073264.1-201ENST00000411508 416 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.79□□□□□ -2.12
HMGN4O00479 BX682237.1-201ENST00000415016 335 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 AC233728.2-201ENST00000425348 757 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 AC114973.1-201ENST00000429057 632 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGN4O00479 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGN4O00479 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGN4O00479 AP002371.1-201ENST00000463604 433 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms