Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC092447.6-201ENST00000414578 210 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AL109741.2-201ENST00000455561 343 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AL031183.1-201ENST00000457667 207 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 MTND3P24-201ENST00000506306 329 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC004062.1-201ENST00000509926 645 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC117525.1-201ENST00000515228 503 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 SNORA31.11-201ENST00000516528 139 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 RN7SKP40-201ENST00000517211 242 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC109329.2-201ENST00000519658 482 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC107954.1-201ENST00000565906 727 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 MIR5194-201ENST00000582634 120 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC022069.1-201ENST00000582910 658 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 BNIP3P22-201ENST00000593399 556 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC138473.1-201ENST00000605717 526 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 AC135803.1-201ENST00000608748 565 ntBASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TRAV27A0A087WT01 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AL049780.3-201ENST00000624612 1583 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 Z99496.1-201ENST00000469424 1477 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 U3.26-201ENST00000391236 204 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AL137014.1-201ENST00000420490 1226 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 FNDC3CP-201ENST00000420795 1155 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AC129850.1-201ENST00000436203 508 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 Z99127.2-201ENST00000441426 334 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AC009961.3-201ENST00000449832 765 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AC004923.2-201ENST00000529649 369 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AP003385.6-201ENST00000531603 374 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AC009163.5-201ENST00000575421 637 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AL390838.2-201ENST00000602394 274 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AL049779.4-201ENST00000604500 156 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 AC007998.5-201ENST00000622938 237 ntBASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV27A0A087WT01 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
TRAV27A0A087WT01 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AL512283.1-201ENST00000606756 1384 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AC008432.1-201ENST00000615912 1320 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 SNORA80E-201ENST00000384744 137 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 ANAPC10P1-201ENST00000395991 556 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AL356057.1-202ENST00000402263 756 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 ATF1P1-201ENST00000406040 927 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AC107081.1-201ENST00000414975 361 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 SUMO1P4-201ENST00000429430 302 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AC104689.1-201ENST00000473356 768 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 RPL37P25-201ENST00000507308 276 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 CDC42P4-201ENST00000510507 563 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AC008494.2-201ENST00000514544 370 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 OR4V1P-201ENST00000525394 1140 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 POLR2KP1-201ENST00000553226 168 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AC090751.1-201ENST00000566966 267 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms