Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 YPEL5P2-201ENST00000605553 359 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC034229.4-201ENST00000607861 441 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC106028.5-201ENST00000610332 395 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 AC243773.3-201ENST00000613270 256 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 MIR8057-201ENST00000620957 69 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA1Q9Y5H4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
PCDHGA1Q9Y5H4 AC007823.1-201ENST00000569932 1566 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 SNORA48.2-201ENST00000390926 124 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 SOD2P1-201ENST00000396543 562 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 HMGB1P17-201ENST00000403495 628 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 TIMM9P2-201ENST00000419324 266 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 RPL27AP8-201ENST00000424277 446 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 MTCO1P39-201ENST00000426148 480 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC087650.1-201ENST00000431445 468 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC069499.1-201ENST00000489433 509 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC109445.1-201ENST00000512356 383 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 RNU6-583P-201ENST00000516012 92 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 NARSP2-201ENST00000518524 679 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC022861.1-201ENST00000522981 663 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AL121766.1-201ENST00000547436 487 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AL133457.1-201ENST00000564251 987 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC106782.4-201ENST00000568264 210 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 MRPS35P3-201ENST00000603189 709 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AL365503.1-201ENST00000605247 905 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AL110115.1-201ENST00000614396 364 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC092628.2-201ENST00000622492 339 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 AL079343.1-201ENST00000572358 1771 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 BDP1P-201ENST00000582658 1990 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 ZNF833P-201ENST00000424938 1494 ntBASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA1Q9Y5H4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 Y_RNA.311-201ENST00000365068 96 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 RPS3AP26-201ENST00000398259 784 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AL356131.1-201ENST00000405826 414 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 BEND7P1-201ENST00000422058 457 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 Z73417.1-201ENST00000447373 778 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC115115.1-201ENST00000449927 248 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 Z82190.1-201ENST00000454534 490 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AP001992.1-205ENST00000462248 379 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 RPS4XP10-201ENST00000465034 731 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 RN7SKP265-201ENST00000516448 223 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 CR383656.7-201ENST00000548164 174 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 MIR4513-201ENST00000581077 86 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms