Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 CR848007.1-201ENST00000442354 1699 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 CPHL1P-201ENST00000461341 3407 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 RNU6-511P-201ENST00000363496 107 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 RNU6-1097P-201ENST00000363586 107 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 U8.4-201ENST00000363626 134 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 RNA5SP235-201ENST00000365411 114 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 RHOT1P2-201ENST00000366423 333 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 RNU6-882P-201ENST00000391025 103 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 RNU6-780P-201ENST00000391030 104 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 SDHCP2-201ENST00000398565 501 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 RNA5SP107-201ENST00000411358 122 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 GPR143P-201ENST00000434155 205 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC090774.1-201ENST00000435925 246 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 HLA-N-201ENST00000437516 135 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC005094.1-201ENST00000440420 368 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AL662791.1-201ENST00000441992 928 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AL512326.1-201ENST00000443050 721 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 RPS4XP4-201ENST00000443195 763 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC016696.1-201ENST00000446949 318 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 MTND2P24-201ENST00000453434 806 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC079804.1-201ENST00000461922 436 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC004453.1-201ENST00000487895 408 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 IGLV2-34-201ENST00000490007 283 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC125611.2-201ENST00000551907 647 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 BNIP3P5-201ENST00000562290 498 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC092325.1-201ENST00000566449 554 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 CYP4A43P-201ENST00000568156 121 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 MIR4489-201ENST00000578869 62 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 SNORD84-203ENST00000584275 78 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC105224.1-201ENST00000587055 421 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC012507.3-201ENST00000603556 477 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC007546.2-201ENST00000623996 360 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AC009161.2-201ENST00000624626 138 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 DDX10P1-201ENST00000448545 1933 ntBASIC4.5□□□□□ -1.69
MKS1Q9NXB0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.5□□□□□ -1.69
MKS1Q9NXB0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC093536.2-201ENST00000565257 1406 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 RNU1-15P-201ENST00000353977 144 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 SNORD56.2-201ENST00000363242 71 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 RNU6-1074P-201ENST00000383995 104 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 Y_RNA.450-201ENST00000384198 113 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 RN7SKP159-201ENST00000410657 292 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 UBE2FP1-201ENST00000416536 447 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 UQCRBP1-201ENST00000421129 336 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AL596276.1-201ENST00000434465 418 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 USP9YP7-201ENST00000436723 430 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC004866.2-201ENST00000438285 481 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 MTCO2P3-201ENST00000442543 421 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 RPL23AP20-201ENST00000447965 421 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AL162389.1-201ENST00000449233 177 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 USP9YP32-201ENST00000452432 430 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC018638.3-201ENST00000461273 132 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 MTCO3P38-201ENST00000468910 766 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC105914.1-201ENST00000511798 226 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 SCARNA24.1-201ENST00000516465 137 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 Vault.1-201ENST00000516474 102 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 SNORA31.20-201ENST00000517111 133 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms