Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC8.22□□□□□ -1.09
FOXD4L1Q9NU39 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.22□□□□□ -1.09
FOXD4L1Q9NU39 RNU6-966P-201ENST00000516479 104 ntBASIC8.22□□□□□ -1.09
FOXD4L1Q9NU39 CYCSP23-201ENST00000519781 313 ntBASIC8.22□□□□□ -1.09
FOXD4L1Q9NU39 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC8.22□□□□□ -1.09
FOXD4L1Q9NU39 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC8.22□□□□□ -1.09
FOXD4L1Q9NU39 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
FOXD4L1Q9NU39 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
FOXD4L1Q9NU39 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
FOXD4L1Q9NU39 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
FOXD4L1Q9NU39 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
FOXD4L1Q9NU39 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
FOXD4L1Q9NU39 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
FOXD4L1Q9NU39 CUL1P1-201ENST00000509510 2425 ntBASIC8.21□□□□□ -1.09
FOXD4L1Q9NU39 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.21□□□□□ -1.09
FOXD4L1Q9NU39 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
FOXD4L1Q9NU39 AL021877.2-201ENST00000624442 10684 ntBASIC8.21□□□□□ -1.09
FOXD4L1Q9NU39 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 Y_RNA.172-201ENST00000363765 102 ntBASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 RNU6-476P-201ENST00000384726 107 ntBASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 SNORD37.2-201ENST00000391075 66 ntBASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 RNU2-68P-201ENST00000410878 191 ntBASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 AL358075.3-201ENST00000426289 226 ntBASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 AC009120.3-201ENST00000563335 499 ntBASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 SNORA70D-201ENST00000578836 135 ntBASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 AC024153.1-201ENST00000603103 365 ntBASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 AL034408.1-202ENST00000636088 415 ntBASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 AP000547.3-204ENST00000588548 2523 ntBASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.21□□□□□ -1.1
FOXD4L1Q9NU39 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AL359693.1-201ENST00000614959 2407 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AC026951.1-201ENST00000559530 2459 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 SNORD115-8-201ENST00000363856 82 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 SNORD115-38-201ENST00000365037 82 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 RPL23AP17-201ENST00000401064 499 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 U3.37-201ENST00000408528 213 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 RNU4-34P-201ENST00000410431 124 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 OR2AM1P-201ENST00000422137 422 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AC079780.1-201ENST00000428259 207 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 RPL12P46-201ENST00000436610 195 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AC243964.1-201ENST00000441814 261 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 MLLT10P2-201ENST00000506434 249 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 RN7SKP122-201ENST00000515923 296 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 RNA5SP206-201ENST00000516703 121 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AP004607.1-201ENST00000524456 203 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AC109309.2-201ENST00000612597 332 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AC138904.2-201ENST00000614412 107 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 MIR6129-201ENST00000616087 109 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 U6.99-201ENST00000637524 83 ntBASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FOXD4L1Q9NU39 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 Y_RNA.101-201ENST00000363154 102 ntBASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 MIR487A-201ENST00000385009 80 ntBASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 CYP4F29P-201ENST00000420685 446 ntBASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 ATP5LP4-201ENST00000434169 307 ntBASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 CHCHD2P7-201ENST00000508008 452 ntBASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 RNA5SP291-201ENST00000517222 105 ntBASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 MAL2-206ENST00000522187 547 ntTSL 4 BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 AC115990.1-201ENST00000526957 301 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms