Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 DNAJC19P1-201ENST00000455312 319 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 MTND3P7-201ENST00000474435 343 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 RPS29P2-201ENST00000479278 136 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC021678.1-201ENST00000505195 936 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC026412.2-201ENST00000512270 1075 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 OR4A45P-201ENST00000529954 901 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC026333.2-201ENST00000542164 106 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 CYCSP2-201ENST00000558168 301 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AL133457.1-201ENST00000564251 987 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AL590229.1-201ENST00000603497 542 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AL596327.1-201ENST00000603629 213 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC064807.4-201ENST00000607201 407 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC008083.4-201ENST00000615076 444 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC009090.3-201ENST00000616553 565 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AL031667.3-201ENST00000620124 655 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC018816.2-201ENST00000621460 353 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC006504.1-201ENST00000562493 3666 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 MTND5P24-201ENST00000438892 1767 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 OR4G11P-202ENST00000642116 1414 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 MFSD8-233ENST00000641482 4860 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 RNA5SP374-201ENST00000362939 125 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 SNORA38.1-201ENST00000364172 131 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 SNORA51.6-201ENST00000384151 125 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 SNORD116-1-201ENST00000384335 95 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 CYCSP45-201ENST00000402289 315 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 HMGB1P17-201ENST00000403495 628 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 AL024474.1-201ENST00000404655 591 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 NDUFB4P4-201ENST00000404822 243 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 AC063979.1-201ENST00000415539 377 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 UBE2FP3-201ENST00000436366 524 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 ISCA1P2-201ENST00000438679 421 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 UBE2D3P4-201ENST00000441973 436 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 AC097493.1-201ENST00000463958 372 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 RPS15AP17-201ENST00000470598 390 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 AC017015.1-201ENST00000477387 286 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 MTCYBP17-201ENST00000503579 789 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 MTCYBP37-201ENST00000510642 1133 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 AC006499.2-201ENST00000513470 337 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 OR8L1P-201ENST00000534005 955 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 OR7K1P-201ENST00000546439 926 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 HSPE1P3-201ENST00000559254 309 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 RPL21P12-201ENST00000559810 515 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 AC091931.1-201ENST00000623488 728 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 AC099063.3-201ENST00000642066 185 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 MTND5P3-201ENST00000438536 1800 ntBASIC4.06□□□□□ -1.76
DDX4Q9NQI0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
DDX4Q9NQI0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 RNU6-500P-201ENST00000362349 107 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AL031577.2-201ENST00000404133 280 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 BTBD10P2-201ENST00000404779 676 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AL512649.1-201ENST00000428997 581 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms