Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AL118496.1-201ENST00000440201 1812 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.52□□□□□ -1.52
CNTNAP4Q9C0A0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 RPL7P26-201ENST00000333817 754 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 RNU6-254P-201ENST00000363377 107 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 ENSAP1-201ENST00000392855 326 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AL136116.1-201ENST00000403591 381 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 RNA5SP36-201ENST00000410197 133 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 RN7SKP58-201ENST00000411010 305 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC009310.1-201ENST00000414414 451 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 MTCO3P21-201ENST00000430791 643 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 IPO7P1-201ENST00000442031 636 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 DDX3P2-201ENST00000446138 111 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AL356010.1-201ENST00000456364 102 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AP1S2P1-201ENST00000457344 379 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 NPM1P41-201ENST00000512920 831 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 TRMT10BP1-201ENST00000519377 943 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 MIR3118-1-201ENST00000581787 76 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC008638.3-201ENST00000603341 463 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AL021997.2-201ENST00000615674 271 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC007546.1-201ENST00000619452 559 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC022106.2-201ENST00000620114 757 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC039056.2-201ENST00000622261 511 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 MTND4P35-201ENST00000604257 1375 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 RLIMP1-201ENST00000339626 1680 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC134882.1-201ENST00000603738 1676 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC105074.1-201ENST00000623380 3095 ntBASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP4Q9C0A0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 NACAP2-201ENST00000318548 624 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 Y_RNA.145-201ENST00000363527 102 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 RNU6-169P-201ENST00000365336 107 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 SNORA4.3-201ENST00000365564 137 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AL031679.1-201ENST00000400616 525 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 Z74021.1-201ENST00000423610 407 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AC137499.1-201ENST00000427602 88 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AC022022.1-201ENST00000430304 178 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AC119618.1-201ENST00000434191 222 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AC024082.2-201ENST00000434771 238 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 GTF2IP13-201ENST00000438487 386 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AC146944.2-203ENST00000502493 354 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AC139495.1-202ENST00000513164 354 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 RNU6-202P-201ENST00000515998 96 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 RNA5SP73-201ENST00000516744 108 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AP005597.4-201ENST00000526762 229 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 OR4R1P-201ENST00000529879 463 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 MIR3171-201ENST00000584270 74 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 SNORD39.3-201ENST00000584451 71 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AL353997.4-201ENST00000586196 166 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AC010525.2-201ENST00000590920 195 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 AL022345.1-201ENST00000607292 135 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 C2orf27A-204ENST00000623058 969 ntBASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTNAP4Q9C0A0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms