Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AP001029.3-201ENST00000588063 596 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 FAM25E-202ENST00000608562 189 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC091953.3-201ENST00000623220 236 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 AP005264.7-201ENST00000625003 745 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 API5-210ENST00000534600 1760 ntTSL 5 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 MTND5P17-201ENST00000418405 1603 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC092747.4-201ENST00000620519 1861 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 LDHAL6CP-202ENST00000550738 3224 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 BDP1P-201ENST00000582658 1990 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 TAB3P1-202ENST00000452645 1634 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 RPL7P26-201ENST00000333817 754 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 SNORA17.1-201ENST00000362945 126 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 RNU6-960P-201ENST00000364056 120 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 SNORA2.3-201ENST00000383920 135 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 RAP1BP3-201ENST00000407180 549 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 RNA5SP118-201ENST00000410385 109 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 TOMM22P1-201ENST00000418578 312 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 MTCYBP8-201ENST00000422855 651 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 RPL36AP6-201ENST00000435770 321 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 CYCSP43-201ENST00000438233 310 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 MTND4P25-201ENST00000441039 533 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AC073415.1-201ENST00000449240 153 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 RN7SL432P-201ENST00000484057 298 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AC083982.1-201ENST00000485679 344 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AC105417.1-201ENST00000514691 285 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 RN7SKP147-201ENST00000517154 244 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AC012400.1-201ENST00000518452 381 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AC092490.3-201ENST00000545370 572 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 NCAPGP2-201ENST00000557911 754 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 MIR4775-201ENST00000581168 75 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 BNIP3P9-201ENST00000603714 553 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AC110801.1-201ENST00000623590 212 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 MIR4275-201ENST00000636486 87 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 MAPK10-349ENST00000641767 3661 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 GABPAP-201ENST00000419271 1356 ntBASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM55Q9BYV6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 Y_RNA.70-201ENST00000362886 110 ntBASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 AL136116.1-201ENST00000403591 381 ntBASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 AL592291.1-201ENST00000403830 352 ntBASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 TXNP7-201ENST00000406296 293 ntBASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 RPL21P111-201ENST00000418453 477 ntBASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 EIF1P3-201ENST00000423841 334 ntBASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 RAC1P6-201ENST00000423911 575 ntBASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 ATP5JP1-201ENST00000431631 322 ntBASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 USP12PX-201ENST00000432383 1057 ntBASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 AL049745.1-201ENST00000433953 286 ntBASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 RPS4XP20-201ENST00000505751 772 ntBASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM55Q9BYV6 SNORA31.22-201ENST00000517204 135 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms