Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC090337.1-201ENST00000579651 2074 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 SNORA20.2-201ENST00000383922 131 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 RNU6-278P-201ENST00000390945 109 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 RPL23AP48-201ENST00000406913 488 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 MIR548F1-201ENST00000408667 84 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 RNU6-712P-201ENST00000410558 100 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 MIR1911-201ENST00000410783 80 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 RPS23P10-201ENST00000416185 486 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AC092832.1-201ENST00000422934 400 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AC137499.1-201ENST00000427602 88 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AC073464.1-201ENST00000429823 534 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 TIMM9P1-201ENST00000436122 256 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 TPT1P14-201ENST00000448018 505 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 FGF7P3-201ENST00000454645 303 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 SNORD108-201ENST00000459332 71 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AK3P4-201ENST00000504283 583 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 PARP4P3-201ENST00000510265 317 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 CDH12P4-201ENST00000517835 295 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 CDH12P3-201ENST00000517935 295 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 CDH12P1-201ENST00000518435 295 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 MED28P5-201ENST00000528254 438 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AC008638.3-201ENST00000603341 463 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AL158211.4-201ENST00000606988 584 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AF250324.2-201ENST00000608299 610 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 MIR6891-201ENST00000618788 93 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 AC244258.1-201ENST00000637553 1071 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 PNPT1P2-201ENST00000456768 2050 ntBASIC4.28□□□□□ -1.72
TRIM54Q9BYV2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC012618.3-205ENST00000637896 1496 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 OR5P1P-201ENST00000299512 925 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 MIR19A-201ENST00000384878 82 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 RPS4XP9-201ENST00000405151 780 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 RNU2-62P-201ENST00000410868 191 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 RNU6-516P-201ENST00000411381 104 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 OR1AA1P-201ENST00000419597 916 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 ELOCP4-201ENST00000420090 333 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 BEND7P1-201ENST00000422058 457 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AL356387.2-201ENST00000422272 243 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 OR4K11P-201ENST00000431829 904 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 RPL35AP22-201ENST00000436855 335 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 UBE2V1P8-201ENST00000437166 265 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC093156.1-201ENST00000440382 670 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AL353748.1-201ENST00000440753 474 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AL121871.1-201ENST00000443413 436 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 RNU7-59P-201ENST00000459101 61 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC079804.1-201ENST00000461922 436 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC007182.2-201ENST00000489251 402 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 RNU6-1095P-201ENST00000516148 108 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC126177.3-201ENST00000551839 688 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC090948.1-201ENST00000607464 549 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC019193.2-201ENST00000610012 634 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC012409.3-201ENST00000611343 981 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AL021997.2-201ENST00000615674 271 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 uc_338.13-201ENST00000618243 179 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AC019278.1-201ENST00000623516 479 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms