Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ABCA3Q99758 DYNLT3P1-201ENST00000378574 347 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 AC008173.1-201ENST00000418901 264 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 TRIAP1P1-201ENST00000427062 225 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 OR4K11P-201ENST00000431829 904 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 RPL36AP6-201ENST00000435770 321 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 MUPP-201ENST00000438111 566 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.76□□□□□ -1.97
ABCA3Q99758 AP000873.1-201ENST00000463987 400 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
ABCA3Q99758 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.76□□□□□ -1.97
ABCA3Q99758 AC126177.3-201ENST00000551839 688 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 TPMTP1-201ENST00000592307 737 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.76□□□□□ -1.97
ABCA3Q99758 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ABCA3Q99758 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
ABCA3Q99758 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.76□□□□□ -1.97
ABCA3Q99758 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ABCA3Q99758 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ABCA3Q99758 RNU1-51P-201ENST00000365345 176 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 U8.10-201ENST00000384260 133 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 RNU6-1140P-201ENST00000410517 106 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 MTND4LP13-201ENST00000425022 298 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 RPS26P30-201ENST00000443431 335 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.76□□□□□ -1.97
ABCA3Q99758 SNRPGP3-201ENST00000469405 227 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 AC006483.1-201ENST00000487308 313 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 AC108078.2-201ENST00000510750 236 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 AL391813.2-201ENST00000609113 322 ntBASIC2.76□□□□□ -1.97
ABCA3Q99758 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ABCA3Q99758 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
ABCA3Q99758 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.75□□□□□ -1.97
ABCA3Q99758 AL096701.2-201ENST00000416920 238 ntBASIC2.75□□□□□ -1.97
ABCA3Q99758 CR769767.1-201ENST00000436337 346 ntBASIC2.75□□□□□ -1.97
ABCA3Q99758 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.75□□□□□ -1.97
ABCA3Q99758 AC092451.1-201ENST00000480211 153 ntBASIC2.75□□□□□ -1.97
ABCA3Q99758 RPS29P11-201ENST00000496507 171 ntBASIC2.75□□□□□ -1.97
ABCA3Q99758 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.75□□□□□ -1.97
ABCA3Q99758 Y_RNA.122-201ENST00000363331 96 ntBASIC2.74□□□□□ -1.97
ABCA3Q99758 TRIM60P18-201ENST00000441518 828 ntBASIC2.74□□□□□ -1.97
ABCA3Q99758 AC092754.2-201ENST00000463506 460 ntBASIC2.74□□□□□ -1.97
ABCA3Q99758 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.74□□□□□ -1.97
ABCA3Q99758 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.74□□□□□ -1.97
ABCA3Q99758 AC007687.1-201ENST00000602704 304 ntBASIC2.74□□□□□ -1.97
ABCA3Q99758 AC120053.1-201ENST00000607706 736 ntBASIC2.74□□□□□ -1.97
ABCA3Q99758 OR1S1-201ENST00000624470 978 ntBASIC2.74□□□□□ -1.97
ABCA3Q99758 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.74□□□□□ -1.97
ABCA3Q99758 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ABCA3Q99758 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ABCA3Q99758 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ABCA3Q99758 AL161431.1-201ENST00000618966 4205 ntBASIC2.74□□□□□ -1.97
ABCA3Q99758 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ABCA3Q99758 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
ABCA3Q99758 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.74□□□□□ -1.97
ABCA3Q99758 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.73□□□□□ -1.97
ABCA3Q99758 AC233279.1-201ENST00000455300 423 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.73□□□□□ -1.97
ABCA3Q99758 RNA5SP480-201ENST00000516840 109 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 FAM92A1P1-201ENST00000528023 890 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 AC067838.1-201ENST00000606064 577 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ABCA3Q99758 CYP3A51P-201ENST00000633513 256 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
ABCA3Q99758 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ABCA3Q99758 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ABCA3Q99758 RNU2-37P-201ENST00000410695 177 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.73□□□□□ -1.97
ABCA3Q99758 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.73□□□□□ -1.97
ABCA3Q99758 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.73□□□□□ -1.97
ABCA3Q99758 USP9YP8-201ENST00000441913 500 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.73□□□□□ -1.97
ABCA3Q99758 SNX5P1-201ENST00000505757 1041 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 ZNF192P1-203ENST00000565888 810 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 AC006270.2-201ENST00000578523 652 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 MIR4255-201ENST00000579351 72 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 AC011468.4-201ENST00000603942 409 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 AC005156.1-201ENST00000613371 573 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 VN1R7P-201ENST00000619242 903 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 AC002064.3-201ENST00000623448 346 ntBASIC2.73□□□□□ -1.97
ABCA3Q99758 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ABCA3Q99758 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ABCA3Q99758 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.72□□□□□ -1.97
ABCA3Q99758 AC131280.1-202ENST00000624067 4211 ntBASIC2.72□□□□□ -1.97
ABCA3Q99758 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.72□□□□□ -1.97
ABCA3Q99758 AL445685.2-201ENST00000422551 342 ntBASIC2.72□□□□□ -1.97
ABCA3Q99758 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.72□□□□□ -1.97
ABCA3Q99758 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.72□□□□□ -1.97
ABCA3Q99758 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.72□□□□□ -1.97
ABCA3Q99758 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.72□□□□□ -1.97
ABCA3Q99758 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.72□□□□□ -1.97
ABCA3Q99758 TMEM248P1-201ENST00000510579 951 ntBASIC2.72□□□□□ -1.97
ABCA3Q99758 AP003385.6-201ENST00000531603 374 ntBASIC2.72□□□□□ -1.97
ABCA3Q99758 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.72□□□□□ -1.97
ABCA3Q99758 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.72□□□□□ -1.97
ABCA3Q99758 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.72□□□□□ -1.97
ABCA3Q99758 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.72□□□□□ -1.97
ABCA3Q99758 RPL23AP61-201ENST00000623642 466 ntBASIC2.72□□□□□ -1.97
ABCA3Q99758 SNORA50A-202ENST00000629536 136 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms