Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC083809.1-201ENST00000615051 472 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 MLECP1-201ENST00000615893 709 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AL138721.1-201ENST00000616756 179 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC068792.1-201ENST00000621354 417 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AL158801.5-201ENST00000623123 465 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NPAS1Q99742 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS1Q99742 FAM35DP-201ENST00000323387 2712 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS1Q99742 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS1Q99742 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
NPAS1Q99742 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS1Q99742 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS1Q99742 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS1Q99742 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
NPAS1Q99742 A2MP1-204ENST00000566278 4130 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.89□□□□□ -1.79
NPAS1Q99742 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.89□□□□□ -1.79
NPAS1Q99742 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 U8.3-201ENST00000363321 132 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 RNA5SP175-201ENST00000364275 119 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 RNA5SP235-201ENST00000365411 114 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS1Q99742 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
NPAS1Q99742 Y_RNA.582-201ENST00000391023 95 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 Y_RNA.599-201ENST00000410489 109 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AC011933.1-201ENST00000413334 321 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.89□□□□□ -1.79
NPAS1Q99742 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AC244098.2-201ENST00000422068 99 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AC092832.1-201ENST00000422934 400 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 FCF1P1-201ENST00000432690 571 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.89□□□□□ -1.79
NPAS1Q99742 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.89□□□□□ -1.79
NPAS1Q99742 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC010655.1-201ENST00000449336 292 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.89□□□□□ -1.79
NPAS1Q99742 HMGB3P30-201ENST00000457863 606 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC116533.1-201ENST00000459748 321 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 RN7SL812P-201ENST00000493791 279 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC093840.1-201ENST00000511599 336 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 RNU6-430P-201ENST00000517078 107 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AP004371.1-201ENST00000525240 214 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS1Q99742 CYCSP29-201ENST00000533731 318 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.89□□□□□ -1.79
NPAS1Q99742 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.89□□□□□ -1.79
NPAS1Q99742 COX6CP3-201ENST00000580869 223 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.89□□□□□ -1.79
NPAS1Q99742 NRBF2P1-201ENST00000587407 859 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC007038.2-201ENST00000608095 740 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AC004908.2-201ENST00000609090 574 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC012150.2-201ENST00000621300 544 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AC009268.2-201ENST00000621925 457 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 AC138649.3-201ENST00000622154 254 ntBASIC3.89□□□□□ -1.79
NPAS1Q99742 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS1Q99742 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.89□□□□□ -1.79
NPAS1Q99742 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.89□□□□□ -1.79
NPAS1Q99742 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
NPAS1Q99742 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS1Q99742 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS1Q99742 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS1Q99742 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.88□□□□□ -1.79
NPAS1Q99742 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NPAS1Q99742 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NPAS1Q99742 RNA5SP443-201ENST00000363083 132 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 RNY1P12-201ENST00000364251 105 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 RNY4P16-201ENST00000364768 94 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AC068538.1-201ENST00000376856 336 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 RNU6-1074P-201ENST00000383995 104 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 RNU6-432P-201ENST00000384196 109 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.88□□□□□ -1.79
NPAS1Q99742 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.88□□□□□ -1.79
NPAS1Q99742 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.88□□□□□ -1.79
NPAS1Q99742 USP9YP36-201ENST00000424581 829 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AC019097.1-201ENST00000424783 735 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 RPS3AP44-201ENST00000425466 790 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms