Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 USP9YP27-201ENST00000418455 438 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC005154.2-201ENST00000438110 379 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 MTCO3P18-201ENST00000440206 761 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC132479.1-201ENST00000449160 144 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 RPS20P24-201ENST00000457473 361 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC007016.1-201ENST00000512110 244 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 Vault.3-201ENST00000516676 95 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 RNU6-445P-201ENST00000516949 107 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 MTND1P35-201ENST00000526739 508 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 LINC00622-201ENST00000562811 1570 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC099489.2-201ENST00000574976 260 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 MIR3118-1-201ENST00000581787 76 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 BNIP3P33-201ENST00000598912 569 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 BPIFA4P-203ENST00000603168 689 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC012507.3-201ENST00000603556 477 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC007363.1-201ENST00000604736 620 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC121334.2-201ENST00000605387 271 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC008536.2-201ENST00000607284 349 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 BX664608.1-201ENST00000610519 487 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC025253.1-201ENST00000613623 543 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC004825.2-201ENST00000616634 455 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AL731566.2-201ENST00000618971 317 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 MIR6853-201ENST00000619642 74 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC010300.1-201ENST00000600671 5134 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX18Q96RF0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC010928.1-201ENST00000592477 1447 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC008033.1-201ENST00000216407 1162 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX18Q96RF0 Y_RNA.89-201ENST00000363031 102 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 RNU1-32P-201ENST00000363937 159 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 RNU6-534P-201ENST00000364877 106 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 SNORA71.2-201ENST00000364941 134 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 RNU6-483P-201ENST00000384088 108 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 RNU1-44P-201ENST00000384453 163 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 MT-TC-201ENST00000387405 66 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 RNU6-876P-201ENST00000391295 104 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX18Q96RF0 FGF7P8-201ENST00000402994 292 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 RN7SKP167-201ENST00000411047 285 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC138393.2-201ENST00000414742 246 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 RWDD4P2-201ENST00000426392 563 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 C4BPAP2-201ENST00000428434 478 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC068287.1-201ENST00000430283 295 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 USP9YP15-201ENST00000442391 422 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 SNRPEP8-201ENST00000442866 260 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 MTND5P20-201ENST00000448677 143 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 MTND3P10-201ENST00000450967 341 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 HMGB3P22-202ENST00000451823 572 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AL513533.1-201ENST00000453728 415 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 RPL12P20-201ENST00000475538 479 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 RPL35P6-201ENST00000490024 372 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 OR5H5P-201ENST00000503164 928 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 NPM1P41-201ENST00000512920 831 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms