Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00477Q96M19 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00477Q96M19 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00477Q96M19 MIR148B-201ENST00000362252 99 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 RNU6-989P-201ENST00000362756 107 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 Y_RNA.192-201ENST00000363977 102 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 RNU6-374P-201ENST00000364146 108 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 RNU6-115P-201ENST00000364310 107 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 RNU6-1300P-201ENST00000391046 108 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00477Q96M19 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC016769.3-201ENST00000396562 315 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 ARF4P3-201ENST00000397387 509 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC025750.1-201ENST00000399891 379 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AL445189.1-201ENST00000405722 338 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 MIR1289-1-201ENST00000408836 144 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 RNA5SP492-201ENST00000411330 114 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 MTATP6P20-201ENST00000414147 562 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 RPS3AP9-201ENST00000417027 792 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC233981.1-201ENST00000423224 461 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 MTND2P5-201ENST00000432656 1006 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00477Q96M19 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 MTCYBP34-201ENST00000439552 670 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 EEF1A1P39-201ENST00000440791 250 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 RPL26P28-201ENST00000451325 435 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC079203.1-201ENST00000487972 404 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 MTCYBP35-201ENST00000503630 1137 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 RNU6-56P-201ENST00000516986 93 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 TRMT10BP1-201ENST00000519377 943 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC087808.1-201ENST00000520501 361 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 LRRC6P1-201ENST00000532188 885 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 MTND1P24-201ENST00000552175 861 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00477Q96M19 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 MIR3912-201ENST00000577566 105 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AL669831.4-202ENST00000590817 238 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC245036.5-201ENST00000596330 847 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC113368.1-201ENST00000603736 382 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC025588.3-201ENST00000604182 274 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 DPRXP5-201ENST00000604662 539 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC124312.4-201ENST00000605533 310 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC080013.3-201ENST00000606839 578 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 AL731566.2-201ENST00000618971 317 ntBASIC2.43□□□□□ -2.02
LINC00477Q96M19 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
LINC00477Q96M19 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00477Q96M19 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 HMGB1P5-201ENST00000255320 642 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 RNU4-68P-201ENST00000364314 141 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 SUGT1P1-201ENST00000379514 476 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 MIR649-201ENST00000384843 97 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 SNORA26.7-201ENST00000391288 122 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 RAB9AP3-201ENST00000412737 573 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 SYF2P2-201ENST00000417620 583 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 ELOCP9-201ENST00000418624 239 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC007435.1-201ENST00000421086 415 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 OR2AS1P-201ENST00000427827 319 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 HMGB3P6-201ENST00000444896 598 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 RAB9AP1-201ENST00000449393 573 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 RFC5P1-201ENST00000454419 874 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 RPL21P131-201ENST00000497298 483 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 MTCYBP17-201ENST00000503579 789 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC004062.1-201ENST00000509926 645 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 RNU1-143P-201ENST00000516296 146 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 ERHP1-201ENST00000523006 310 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 OR5B10P-201ENST00000532869 642 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms