Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MRPL42P6-201ENST00000486397 371 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 RN7SL591P-201ENST00000496150 292 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 RNU6-189P-201ENST00000516120 101 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 RNU6-861P-201ENST00000516745 106 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 BNIP3P1-201ENST00000547295 580 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 LSM3P2-201ENST00000551246 273 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 OR11H5P-201ENST00000554039 926 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 AL445363.3-201ENST00000623080 671 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 Z95114.1-201ENST00000624264 14574 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 SNORA17.1-201ENST00000362945 126 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 RNA5SP326-201ENST00000363209 110 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 RNA5SP123-201ENST00000363244 119 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 Y_RNA.237-201ENST00000364439 102 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 Y_RNA.277-201ENST00000364754 102 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 Y_RNA.304-201ENST00000365011 112 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 RNU6-417P-201ENST00000384712 107 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 MIR558-201ENST00000384920 94 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 MRPL35P1-201ENST00000404272 572 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AC096664.2-201ENST00000411843 406 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AC096632.1-201ENST00000427395 310 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 TMEM183AP1-205ENST00000432739 290 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AL590399.4-201ENST00000436561 601 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AL031663.1-201ENST00000437445 219 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AL035404.1-201ENST00000497982 568 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AP000907.2-201ENST00000530827 353 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 MAGOH2P-202ENST00000584384 429 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AL031320.1-201ENST00000604177 357 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 BX284668.6-201ENST00000606899 438 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AC023509.5-201ENST00000617434 807 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.29□□□□□ -1.4
TRIM47Q96LD4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM47Q96LD4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 KPNA2P2-201ENST00000419546 1489 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC083837.1-201ENST00000565297 2994 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 HSPA8P14-201ENST00000552265 1805 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AL360270.2-201ENST00000562952 5985 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 MIR335-201ENST00000362173 94 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 RNU6-44P-201ENST00000384045 107 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 RNU6-1203P-201ENST00000410703 110 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC012065.2-201ENST00000421295 375 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AL590632.1-201ENST00000424289 371 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 HMGB3P21-201ENST00000452483 547 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC104563.1-201ENST00000476147 376 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 RN7SL481P-201ENST00000477764 299 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 RPS17P5-201ENST00000498293 408 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC116562.3-201ENST00000506136 177 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 IGKV2-38-201ENST00000517443 247 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 HIGD1AP6-201ENST00000521833 279 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms