Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2□□□□□ -2.09
TTC28Q96AY4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TTC28Q96AY4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
TTC28Q96AY4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2□□□□□ -2.09
TTC28Q96AY4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2□□□□□ -2.09
TTC28Q96AY4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2□□□□□ -2.09
TTC28Q96AY4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2□□□□□ -2.09
TTC28Q96AY4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2□□□□□ -2.09
TTC28Q96AY4 MIR151B-201ENST00000584249 96 ntBASIC2□□□□□ -2.09
TTC28Q96AY4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2□□□□□ -2.09
TTC28Q96AY4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
TTC28Q96AY4 MIR548J-201ENST00000408833 112 ntBASIC1.99□□□□□ -2.09
TTC28Q96AY4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TTC28Q96AY4 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.99□□□□□ -2.09
TTC28Q96AY4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC1.99□□□□□ -2.09
TTC28Q96AY4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.99□□□□□ -2.09
TTC28Q96AY4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.99□□□□□ -2.09
TTC28Q96AY4 OR10AB1P-201ENST00000609613 938 ntBASIC1.99□□□□□ -2.09
TTC28Q96AY4 MIR8081-201ENST00000611533 95 ntBASIC1.99□□□□□ -2.09
TTC28Q96AY4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC1.99□□□□□ -2.09
TTC28Q96AY4 AC093909.5-201ENST00000621839 1799 ntBASIC1.99□□□□□ -2.09
TTC28Q96AY4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.99□□□□□ -2.09
TTC28Q96AY4 OR5H15-201ENST00000383696 930 ntBASIC1.99□□□□□ -2.09
TTC28Q96AY4 Y_RNA.681-201ENST00000516445 113 ntBASIC1.99□□□□□ -2.09
TTC28Q96AY4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
TTC28Q96AY4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
TTC28Q96AY4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TTC28Q96AY4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.98□□□□□ -2.09
TTC28Q96AY4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
TTC28Q96AY4 MIR142-201ENST00000384835 87 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.98□□□□□ -2.09
TTC28Q96AY4 CDC42P1-201ENST00000456658 548 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 RPS29P11-201ENST00000496507 171 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 AC055876.1-202ENST00000567053 138 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 BX664608.1-201ENST00000610519 487 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
TTC28Q96AY4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TTC28Q96AY4 AC092881.1-201ENST00000638218 2733 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 MIR96-201ENST00000362288 78 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 AL354719.1-201ENST00000406535 843 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 RN7SKP285-201ENST00000410137 318 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 AL445213.1-201ENST00000412589 747 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 AL022400.1-201ENST00000423946 935 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 KATNBL1P3-201ENST00000443475 909 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.98□□□□□ -2.09
TTC28Q96AY4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.98□□□□□ -2.09
TTC28Q96AY4 MTAPP1-201ENST00000489154 819 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.98□□□□□ -2.09
TTC28Q96AY4 AL391646.1-201ENST00000603860 190 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.98□□□□□ -2.09
TTC28Q96AY4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TTC28Q96AY4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TTC28Q96AY4 AC244033.1-201ENST00000426826 870 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 AC027124.2-201ENST00000428249 105 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.97□□□□□ -2.09
TTC28Q96AY4 RPS27P27-201ENST00000498779 255 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 OR4R2P-201ENST00000530815 597 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.97□□□□□ -2.09
TTC28Q96AY4 RMST_9.1-201ENST00000619945 193 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.97□□□□□ -2.09
TTC28Q96AY4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TTC28Q96AY4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
TTC28Q96AY4 SPATA2P1-201ENST00000431223 2055 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
TTC28Q96AY4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TTC28Q96AY4 RNU4-44P-201ENST00000363050 141 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 GCNT6-201ENST00000379591 934 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 Z98749.2-208ENST00000381646 500 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TTC28Q96AY4 SNORA48.3-201ENST00000391081 134 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 RPL23AP74-201ENST00000437246 471 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.97□□□□□ -2.09
TTC28Q96AY4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.97□□□□□ -2.09
TTC28Q96AY4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC1.97□□□□□ -2.09
TTC28Q96AY4 MIR2114-201ENST00000516645 80 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.97□□□□□ -2.09
TTC28Q96AY4 AL031274.2-201ENST00000599419 203 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 AC136443.5-201ENST00000603741 370 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 AC096720.1-201ENST00000604441 183 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 AC002487.1-201ENST00000604565 994 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 AC092650.2-201ENST00000619984 902 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 AC244517.12-201ENST00000623581 663 ntBASIC1.97□□□□□ -2.09
TTC28Q96AY4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.97□□□□□ -2.09
TTC28Q96AY4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TTC28Q96AY4 AL583834.1-201ENST00000406943 343 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 AC244505.5-201ENST00000443639 207 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 AC034244.1-201ENST00000507687 207 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 OR4G1P-201ENST00000588632 938 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
TTC28Q96AY4 MIR423-201ENST00000362201 94 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 SNORA7.1-201ENST00000363750 139 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 AL627390.1-201ENST00000396055 340 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 LAP3P1-201ENST00000403648 294 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 RNA5SP129-201ENST00000410276 118 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms