Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC122133.1-201ENST00000613964 233 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC099506.2-201ENST00000623074 221 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC022031.1-201ENST00000585985 2593 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNED1Q8TER0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNED1Q8TER0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 ZNF849P-201ENST00000594711 1566 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 AL390237.1-201ENST00000404226 1415 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 GTF2H2B-203ENST00000508065 1432 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNED1Q8TER0 SNORA71.1-201ENST00000364523 117 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.79□□□□□ -1.8
SNED1Q8TER0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC004022.2-201ENST00000413824 193 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 BTF3P8-201ENST00000414577 526 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.79□□□□□ -1.8
SNED1Q8TER0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.79□□□□□ -1.8
SNED1Q8TER0 AL109933.2-201ENST00000452651 260 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 BZW1P2-201ENST00000473537 826 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 RPL23AP44-201ENST00000482216 473 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 RPS4XP13-201ENST00000483219 789 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC107398.1-201ENST00000486904 505 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNED1Q8TER0 OR5H4P-201ENST00000510851 923 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC119751.1-201ENST00000513357 765 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 RNU6-232P-201ENST00000517144 64 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.79□□□□□ -1.8
SNED1Q8TER0 PDCL2P2-201ENST00000533651 189 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC022880.1-201ENST00000534017 973 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.79□□□□□ -1.8
SNED1Q8TER0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC010546.1-201ENST00000569391 485 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC115085.1-201ENST00000588924 229 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC067852.4-201ENST00000590314 478 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 DUXAP11-201ENST00000603858 526 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 RBM11P1-201ENST00000604951 799 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC010680.4-201ENST00000605334 543 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AL139286.2-201ENST00000606838 396 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.79□□□□□ -1.8
SNED1Q8TER0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC116165.2-201ENST00000616705 206 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC079248.2-201ENST00000623779 326 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC091965.5-201ENST00000624785 342 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.79□□□□□ -1.8
SNED1Q8TER0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.79□□□□□ -1.8
SNED1Q8TER0 AC104446.1-201ENST00000613728 1321 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNED1Q8TER0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.79□□□□□ -1.8
SNED1Q8TER0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNED1Q8TER0 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.79□□□□□ -1.8
SNED1Q8TER0 XGY1-201ENST00000381172 446 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 AL593851.1-201ENST00000426171 157 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 MTND2P20-201ENST00000440805 661 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 AC009263.1-201ENST00000441193 1239 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 MRPL42P4-201ENST00000453267 443 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 ANKRD26P4-201ENST00000455755 950 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 HMGN2P7-201ENST00000456186 273 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 RN7SL432P-201ENST00000484057 298 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 RPL30P11-201ENST00000495304 339 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 AC109927.2-201ENST00000506416 303 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 MTCO2P32-201ENST00000514865 403 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 MIR2114-201ENST00000516645 80 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 RNU6-759P-201ENST00000516740 103 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 AC022662.1-201ENST00000580252 331 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 MIR4801-201ENST00000582704 82 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 AP001269.3-201ENST00000588718 329 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 AP002906.1-201ENST00000603405 233 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNED1Q8TER0 MIR6715A-201ENST00000615929 79 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 AL359693.1-201ENST00000614959 2407 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SNED1Q8TER0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNED1Q8TER0 SNORD116.1-201ENST00000365628 92 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 RNU6-932P-201ENST00000391108 106 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 MTCO1P56-201ENST00000401674 224 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 RPL30P2-201ENST00000414021 291 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 RAD23BP2-201ENST00000416003 1207 ntBASIC3.78□□□□□ -1.8
SNED1Q8TER0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms