Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC025034.2-201ENST00000623264 286 ntBASIC4.76□□□□□ -1.65
NUP43Q8NFH3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
NUP43Q8NFH3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.76□□□□□ -1.65
NUP43Q8NFH3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP43Q8NFH3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.76□□□□□ -1.65
NUP43Q8NFH3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NUP43Q8NFH3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
NUP43Q8NFH3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP43Q8NFH3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP43Q8NFH3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 RNU6-188P-201ENST00000364207 107 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 Y_RNA.401-201ENST00000383965 117 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 Y_RNA.452-201ENST00000384202 108 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 SNORA24.1-201ENST00000384401 135 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 SNORA70-201ENST00000384436 135 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AL139397.2-201ENST00000404529 772 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 RNU6-954P-201ENST00000411355 107 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 VDAC1P9-201ENST00000412766 841 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC104333.2-201ENST00000422630 192 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 HMGN2P27-201ENST00000427352 270 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AF228730.2-201ENST00000438784 848 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 MTND1P17-201ENST00000448961 204 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 RPL30P15-201ENST00000457129 321 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 RN7SL441P-201ENST00000492388 296 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 RFPL4AP5-201ENST00000514977 504 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 RNU6-64P-201ENST00000517119 105 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC105031.1-201ENST00000518550 476 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC124068.1-201ENST00000563131 678 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 MIR4680-201ENST00000580906 66 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 MIR5690-201ENST00000583739 73 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 MIR4293-201ENST00000584305 78 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC092747.3-201ENST00000603769 301 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AP001005.3-201ENST00000622049 129 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC008013.2-202ENST00000637965 364 ntBASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP43Q8NFH3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 AC117470.1-201ENST00000381974 330 ntBASIC4.74□□□□□ -1.65
NUP43Q8NFH3 Y_RNA.482-201ENST00000384377 111 ntBASIC4.74□□□□□ -1.65
NUP43Q8NFH3 Y_RNA.576-201ENST00000384781 102 ntBASIC4.74□□□□□ -1.65
NUP43Q8NFH3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 RN7SKP114-201ENST00000410327 279 ntBASIC4.74□□□□□ -1.65
NUP43Q8NFH3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 POLHP1-201ENST00000411806 470 ntBASIC4.74□□□□□ -1.65
NUP43Q8NFH3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 RPS12P24-201ENST00000412619 387 ntBASIC4.74□□□□□ -1.65
NUP43Q8NFH3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.74□□□□□ -1.65
NUP43Q8NFH3 AL139396.1-201ENST00000421137 167 ntBASIC4.74□□□□□ -1.65
NUP43Q8NFH3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP43Q8NFH3 AC105402.2-201ENST00000438503 358 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms