Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 HMGB3P23-201ENST00000414981 585 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 RPS24P7-201ENST00000416921 246 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 MTCO1P39-201ENST00000426148 480 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC097262.1-201ENST00000452559 548 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AL136097.1-201ENST00000456945 913 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 RPL23AP67-201ENST00000465341 474 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 MTCYBP35-201ENST00000503630 1137 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 COX7A2P2-201ENST00000505291 250 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC112198.1-201ENST00000505369 1220 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 RNU6-1225P-201ENST00000516336 65 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC023050.2-201ENST00000544968 387 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 MTND4P33-201ENST00000556706 766 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC090888.2-201ENST00000559765 1144 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 MIR5186-201ENST00000577504 120 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 MIR4637-201ENST00000582405 84 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AL031176.1-201ENST00000604554 466 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC016877.3-201ENST00000606778 504 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC080013.4-201ENST00000607624 649 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AL355365.1-201ENST00000616480 294 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC068831.7-201ENST00000616954 363 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC110801.1-201ENST00000623590 212 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC120349.2-201ENST00000625002 298 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC127502.3-201ENST00000636170 1206 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 OR4G11P-202ENST00000642116 1414 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 RNA5SP197-201ENST00000363357 119 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 SNORA40.2-201ENST00000390847 128 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 RPL30P2-201ENST00000414021 291 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AL161449.1-201ENST00000414531 1199 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 RPL7P30-201ENST00000420888 709 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AL159987.2-201ENST00000432754 307 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 SNRPEP4-201ENST00000435815 279 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC004866.2-201ENST00000438285 481 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 RPS4XP10-201ENST00000465034 731 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC093663.1-201ENST00000497190 394 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC020893.1-201ENST00000502452 580 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC113347.3-201ENST00000509113 148 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC107934.2-201ENST00000518653 310 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 DUXAP2-201ENST00000519198 589 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 DUXAP5-201ENST00000529668 529 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 SETP7-201ENST00000552169 453 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 TGIF1P1-201ENST00000558095 802 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 MAGOH2P-202ENST00000584384 429 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC015688.2-201ENST00000584523 262 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 VN1R83P-201ENST00000595685 445 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC024257.5-201ENST00000612739 531 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC009464.1-201ENST00000615731 469 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 MIR6075-201ENST00000620782 95 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AL353748.2-201ENST00000622148 471 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AP002791.1-201ENST00000623291 381 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 MIR1322-201ENST00000638013 71 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AC021755.1-201ENST00000559747 1447 ntBASIC3.49□□□□□ -1.85
RTL3Q8N8U3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.49□□□□□ -1.85
RTL3Q8N8U3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AL353746.1-201ENST00000566293 6881 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 RNU6-1155P-201ENST00000363554 107 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 RNU1-33P-201ENST00000364249 162 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 218.1 ms