Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AL359893.1-201ENST00000447628 1580 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 MTND4P16-201ENST00000466108 1367 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 RNU6-777P-201ENST00000364265 104 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 RNU4-91P-201ENST00000364778 135 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AL035410.1-201ENST00000427409 427 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 RPL23AP83-201ENST00000434984 473 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AL353706.1-201ENST00000436728 494 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 BMI1P1-201ENST00000445879 941 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 PDSS1P2-201ENST00000449397 678 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 ANP32BP2-201ENST00000454525 545 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 OR5H5P-201ENST00000503164 928 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 MTND4P2-201ENST00000507767 1203 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AC026726.1-201ENST00000512859 601 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 GNRHR2P1-201ENST00000555315 631 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 MIR4644-201ENST00000579929 84 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 OR4G1P-201ENST00000588632 938 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AC112187.2-201ENST00000604345 283 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AC012468.1-201ENST00000604888 430 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AC122108.2-201ENST00000611946 526 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 AL356473.1-201ENST00000406203 1408 ntBASIC4.18□□□□□ -1.74
VPS52Q8N1B4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS52Q8N1B4 PABPC1P9-201ENST00000426076 1612 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 Y_RNA.194-201ENST00000363985 102 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 RNU6-343P-201ENST00000364709 104 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 U1.1-201ENST00000384101 164 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 MIR1251-201ENST00000408552 70 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 RPL7AP73-201ENST00000413490 353 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 HMGB1P11-201ENST00000413899 637 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AC068533.1-201ENST00000418542 415 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 FNDC3CP-201ENST00000420795 1155 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AC012065.2-201ENST00000421295 375 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AL591419.1-201ENST00000427423 339 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 RPL7P28-201ENST00000437739 740 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AF228730.2-201ENST00000438784 848 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 PLGLA-201ENST00000465668 449 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 RN7SL271P-201ENST00000487601 295 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AC004069.2-201ENST00000505438 1114 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 POU5F1P7-201ENST00000508759 541 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 MTCO3P7-201ENST00000510008 774 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 MTCO2P32-201ENST00000514865 403 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 SCARNA14-201ENST00000516903 136 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 NARSP2-201ENST00000518524 679 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AP004242.1-201ENST00000533701 349 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AC091489.2-201ENST00000566263 604 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 U73023.1-201ENST00000603134 700 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 SRGNP1-201ENST00000603392 451 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AC090186.1-201ENST00000605991 572 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 AC009878.1-201ENST00000621819 340 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 DCAF13P1-201ENST00000495256 1330 ntBASIC4.17□□□□□ -1.74
VPS52Q8N1B4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS52Q8N1B4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 PABPC1P7-201ENST00000413177 1513 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 Y_RNA.97-201ENST00000363094 102 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 SNORD3H-201ENST00000384486 214 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 Y_RNA.553-201ENST00000384670 102 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms