Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PACS1Q6VY07 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PACS1Q6VY07 AL355379.1-201ENST00000405542 640 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 RPS15AP6-201ENST00000420703 385 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 RPL7P30-201ENST00000420888 709 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.71□□□□□ -1.82
PACS1Q6VY07 TRIAP1P1-201ENST00000427062 225 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 ZYG11AP1-201ENST00000430329 837 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 MTCYBP39-201ENST00000437562 491 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 ZNF114P1-201ENST00000453500 292 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 USP9YP10-201ENST00000454868 628 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC099563.1-201ENST00000456086 418 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC026410.2-201ENST00000460281 156 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 AL133162.1-201ENST00000463228 453 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 AP002884.2-201ENST00000471647 395 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 SETP11-201ENST00000473027 690 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 RPS3AP50-201ENST00000487064 803 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC006483.1-201ENST00000487308 313 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.71□□□□□ -1.82
PACS1Q6VY07 NPM1P41-201ENST00000512920 831 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.71□□□□□ -1.82
PACS1Q6VY07 HIGD1AP3-201ENST00000515857 278 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.71□□□□□ -1.82
PACS1Q6VY07 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC239860.2-201ENST00000525886 270 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PACS1Q6VY07 OR4A45P-201ENST00000529954 901 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC008011.1-201ENST00000545989 227 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.71□□□□□ -1.82
PACS1Q6VY07 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PACS1Q6VY07 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PACS1Q6VY07 HSPE1P5-201ENST00000561489 272 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 MIR4425-201ENST00000580572 84 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC025588.3-201ENST00000604182 274 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 U73479.1-201ENST00000618062 168 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC018816.2-201ENST00000621460 353 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC099063.3-201ENST00000642066 185 ntBASIC3.71□□□□□ -1.82
PACS1Q6VY07 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PACS1Q6VY07 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PACS1Q6VY07 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PACS1Q6VY07 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PACS1Q6VY07 OR4G11P-202ENST00000642116 1414 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PACS1Q6VY07 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PACS1Q6VY07 RNA5SP479-201ENST00000364858 117 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 RNA5SP88-201ENST00000365560 109 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AC007066.1-201ENST00000392902 381 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 AL024474.1-201ENST00000404655 591 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 MIR1193-201ENST00000408109 78 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 RN7SKP156-201ENST00000410308 342 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 TPMTP3-201ENST00000411928 735 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AC016907.1-201ENST00000419483 435 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AC092017.2-201ENST00000427600 362 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AL662791.1-201ENST00000441992 928 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 KATNBL1P3-201ENST00000443475 909 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 AL590399.6-201ENST00000446396 307 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 UBDP1-202ENST00000457888 382 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 MEMO1P3-201ENST00000459811 302 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 PLGLA-201ENST00000465668 449 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 PABPC1P3-201ENST00000469174 459 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 RPL7P5-201ENST00000471472 736 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 ARL2BPP6-201ENST00000512757 439 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AL121766.1-201ENST00000547436 487 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 OR4H12P-201ENST00000556269 907 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 ROCK1P1-201ENST00000573767 549 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 RNU1-30P-201ENST00000606575 163 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 AC009090.3-201ENST00000616553 565 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 AC009318.4-201ENST00000620496 486 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 AL356266.1-201ENST00000623311 483 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 MIR7153-201ENST00000637758 57 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.7□□□□□ -1.82
PACS1Q6VY07 SAGE4P-201ENST00000442271 3381 ntBASIC3.7□□□□□ -1.82
PACS1Q6VY07 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms