Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.4□□□□□ -1.87
CNTN1Q12860 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CNTN1Q12860 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNTN1Q12860 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CNTN1Q12860 SNORA38.1-201ENST00000364172 131 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNTN1Q12860 U3.19-201ENST00000390893 196 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 RNU6-821P-201ENST00000390995 107 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 AL121972.1-201ENST00000402023 252 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 AL136116.1-201ENST00000403591 381 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 MIR1284-201ENST00000408337 120 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 RNU6-757P-201ENST00000410334 100 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 RPL30P2-201ENST00000414021 291 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 AC127526.1-201ENST00000417526 366 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 MTCO2P21-201ENST00000419780 677 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 AC012065.2-201ENST00000421295 375 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 AL049610.1-201ENST00000423374 372 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AL158071.1-201ENST00000430315 461 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.39□□□□□ -1.87
CNTN1Q12860 MTND1P32-201ENST00000433043 938 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 RPL23AP74-201ENST00000437246 471 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 AC091862.1-201ENST00000438016 1100 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.39□□□□□ -1.87
CNTN1Q12860 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNTN1Q12860 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AC114981.1-201ENST00000503897 678 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 AC006499.2-201ENST00000513470 337 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.39□□□□□ -1.87
CNTN1Q12860 OR5AK1P-201ENST00000524837 922 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.39□□□□□ -1.87
CNTN1Q12860 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNTN1Q12860 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.39□□□□□ -1.87
CNTN1Q12860 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AL606834.2-201ENST00000602954 668 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 YPEL5P2-201ENST00000605553 359 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 AC006270.3-201ENST00000605967 1036 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.39□□□□□ -1.87
CNTN1Q12860 AC245297.2-201ENST00000610119 565 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 TUSC7.1-201ENST00000610969 165 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 AC087683.2-201ENST00000611384 326 ntBASIC3.39□□□□□ -1.87
CNTN1Q12860 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.39□□□□□ -1.87
CNTN1Q12860 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.39□□□□□ -1.87
CNTN1Q12860 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNTN1Q12860 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CNTN1Q12860 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.38□□□□□ -1.87
CNTN1Q12860 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CNTN1Q12860 AL079343.1-201ENST00000572358 1771 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CNTN1Q12860 SNORD113-6-201ENST00000363345 75 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 RNU6-837P-201ENST00000391056 108 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 DHFRP6-201ENST00000401776 268 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AL583834.1-201ENST00000406943 343 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 Z99755.1-201ENST00000414048 380 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.38□□□□□ -1.87
CNTN1Q12860 AL513174.1-201ENST00000423182 629 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 GLRXP1-201ENST00000423261 334 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.38□□□□□ -1.87
CNTN1Q12860 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.38□□□□□ -1.87
CNTN1Q12860 AL357552.1-201ENST00000445254 415 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.38□□□□□ -1.87
CNTN1Q12860 RN7SL330P-201ENST00000469709 307 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.38□□□□□ -1.87
CNTN1Q12860 NCOR1P1-202ENST00000486162 291 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CNTN1Q12860 AC021678.1-201ENST00000505195 936 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AC112198.1-201ENST00000505369 1220 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.38□□□□□ -1.87
CNTN1Q12860 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.38□□□□□ -1.87
CNTN1Q12860 SNORA70.19-201ENST00000516717 90 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AC023538.1-201ENST00000534576 736 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.38□□□□□ -1.87
CNTN1Q12860 AL158211.1-201ENST00000566763 763 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 MIR3186-201ENST00000577404 85 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.38□□□□□ -1.87
CNTN1Q12860 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.38□□□□□ -1.87
CNTN1Q12860 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.38□□□□□ -1.87
CNTN1Q12860 BNIP3P11-201ENST00000603878 563 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AL162713.1-201ENST00000604480 262 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AC140725.3-201ENST00000616193 880 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AC021755.4-201ENST00000616620 456 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 AP000770.2-201ENST00000623694 100 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNTN1Q12860 AC138649.5-201ENST00000637456 137 ntBASIC3.38□□□□□ -1.87
CNTN1Q12860 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.38□□□□□ -1.87
CNTN1Q12860 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNTN1Q12860 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.38□□□□□ -1.87
CNTN1Q12860 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNTN1Q12860 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.38□□□□□ -1.87
CNTN1Q12860 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.38□□□□□ -1.87
CNTN1Q12860 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms