Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGXB3Q12766 RNU6-328P-201ENST00000390887 106 ntBASIC3.36□□□□□ -1.87
HMGXB3Q12766 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGXB3Q12766 ARF4P2-201ENST00000430209 526 ntBASIC3.36□□□□□ -1.87
HMGXB3Q12766 OR4P1P-201ENST00000530808 1136 ntBASIC3.36□□□□□ -1.87
HMGXB3Q12766 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGXB3Q12766 AL589994.2-201ENST00000621124 579 ntBASIC3.36□□□□□ -1.87
HMGXB3Q12766 AC084035.1-201ENST00000634543 607 ntBASIC3.36□□□□□ -1.87
HMGXB3Q12766 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGXB3Q12766 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGXB3Q12766 KPNA2P1-201ENST00000458289 1591 ntBASIC3.36□□□□□ -1.87
HMGXB3Q12766 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGXB3Q12766 RNU6-392P-201ENST00000364926 101 ntBASIC3.35□□□□□ -1.87
HMGXB3Q12766 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGXB3Q12766 RPL23AP58-201ENST00000440453 469 ntBASIC3.35□□□□□ -1.87
HMGXB3Q12766 RPS7P5-201ENST00000441482 581 ntBASIC3.35□□□□□ -1.87
HMGXB3Q12766 AC104564.1-201ENST00000493028 407 ntBASIC3.35□□□□□ -1.87
HMGXB3Q12766 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGXB3Q12766 SNORA25.15-201ENST00000516487 89 ntBASIC3.35□□□□□ -1.87
HMGXB3Q12766 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGXB3Q12766 OR4T1P-201ENST00000554933 911 ntBASIC3.35□□□□□ -1.87
HMGXB3Q12766 AC068790.3-201ENST00000602988 553 ntBASIC3.35□□□□□ -1.87
HMGXB3Q12766 RNU6-84P-201ENST00000607737 102 ntBASIC3.35□□□□□ -1.87
HMGXB3Q12766 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGXB3Q12766 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGXB3Q12766 AL590084.1-201ENST00000407885 387 ntBASIC3.34□□□□□ -1.87
HMGXB3Q12766 MIR1276-201ENST00000408707 83 ntBASIC3.34□□□□□ -1.87
HMGXB3Q12766 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGXB3Q12766 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGXB3Q12766 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGXB3Q12766 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGXB3Q12766 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGXB3Q12766 AC073387.2-201ENST00000604797 784 ntBASIC3.34□□□□□ -1.87
HMGXB3Q12766 AC090897.3-201ENST00000636973 1157 ntBASIC3.34□□□□□ -1.87
HMGXB3Q12766 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGXB3Q12766 HMGB1P31-201ENST00000437242 427 ntBASIC3.34□□□□□ -1.88
HMGXB3Q12766 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.34□□□□□ -1.88
HMGXB3Q12766 MTAPP1-201ENST00000489154 819 ntBASIC3.34□□□□□ -1.88
HMGXB3Q12766 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.34□□□□□ -1.88
HMGXB3Q12766 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HMGXB3Q12766 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.34□□□□□ -1.88
HMGXB3Q12766 BX005019.1-201ENST00000561881 1810 ntBASIC3.33□□□□□ -1.88
HMGXB3Q12766 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGXB3Q12766 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGXB3Q12766 CEACAMP4-201ENST00000457676 421 ntBASIC3.33□□□□□ -1.88
HMGXB3Q12766 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGXB3Q12766 TMEM248P1-201ENST00000510579 951 ntBASIC3.33□□□□□ -1.88
HMGXB3Q12766 RNA5SP480-201ENST00000516840 109 ntBASIC3.33□□□□□ -1.88
HMGXB3Q12766 AC025881.1-201ENST00000518851 512 ntBASIC3.33□□□□□ -1.88
HMGXB3Q12766 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGXB3Q12766 SNRPGP19-201ENST00000603826 189 ntBASIC3.33□□□□□ -1.88
HMGXB3Q12766 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.33□□□□□ -1.88
HMGXB3Q12766 AC010872.1-201ENST00000624225 675 ntBASIC3.33□□□□□ -1.88
HMGXB3Q12766 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGXB3Q12766 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGXB3Q12766 ATP5F1P1-201ENST00000433775 569 ntBASIC3.32□□□□□ -1.88
HMGXB3Q12766 Z73417.1-201ENST00000447373 778 ntBASIC3.32□□□□□ -1.88
HMGXB3Q12766 RNA5SP490-201ENST00000517141 136 ntBASIC3.32□□□□□ -1.88
HMGXB3Q12766 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGXB3Q12766 AC087241.2-201ENST00000535801 324 ntBASIC3.32□□□□□ -1.88
HMGXB3Q12766 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGXB3Q12766 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HMGXB3Q12766 SNORA79B-201ENST00000410557 148 ntBASIC3.31□□□□□ -1.88
HMGXB3Q12766 AL590762.3-201ENST00000436372 640 ntBASIC3.31□□□□□ -1.88
HMGXB3Q12766 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGXB3Q12766 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGXB3Q12766 CDC42P1-201ENST00000456658 548 ntBASIC3.31□□□□□ -1.88
HMGXB3Q12766 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGXB3Q12766 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HMGXB3Q12766 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.31□□□□□ -1.88
HMGXB3Q12766 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.31□□□□□ -1.88
HMGXB3Q12766 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGXB3Q12766 NF1P5-201ENST00000588287 448 ntBASIC3.31□□□□□ -1.88
HMGXB3Q12766 RPP40P2-201ENST00000603596 712 ntBASIC3.31□□□□□ -1.88
HMGXB3Q12766 AP000787.2-201ENST00000604432 568 ntBASIC3.31□□□□□ -1.88
HMGXB3Q12766 HMGN2P28-201ENST00000606102 262 ntBASIC3.31□□□□□ -1.88
HMGXB3Q12766 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGXB3Q12766 AC092326.2-201ENST00000624772 1561 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
HMGXB3Q12766 Y_RNA.122-201ENST00000363331 96 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 RPL21P75-201ENST00000396599 483 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 RPL21P1-201ENST00000399532 476 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGXB3Q12766 RPL21P28-201ENST00000401418 483 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 AL592114.1-201ENST00000403842 483 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 RWDD4P2-201ENST00000426392 563 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGXB3Q12766 NDUFS5P3-201ENST00000450668 321 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.3□□□□□ -1.88
HMGXB3Q12766 RWDD4P1-201ENST00000488019 565 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 RPL21P16-201ENST00000495531 483 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGXB3Q12766 COX6CP5-201ENST00000527162 228 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGXB3Q12766 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGXB3Q12766 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HMGXB3Q12766 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
HMGXB3Q12766 AC093775.1-201ENST00000624154 1868 ntBASIC3.3□□□□□ -1.88
HMGXB3Q12766 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGXB3Q12766 SNORD6-201ENST00000365444 73 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms